Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1079 ATGGCAACAACTTTGCTGGTGAAGGAGCATGGATTGAACCTGAAGGAGACTGAGCTTTGCCTCGGTTTACCTGGTGGTGGTTCTGAGGTGGAAACTCCAAGGGCCAATGGGAAGAGAGGGTTCTCTGAGACTGTTGATCTGAAACTTAATCTTCCTTCTAAGGAAGATCTGAATGAGAATCTGAAGAATGTCTCAAAGGAGAAGACCCTCCTTAACGACCCTGCCAAGCCACCAGCTAAGGCTCAAGTAGTTGGTTGGCCACCAGTGAGGTCATATAGGAAGAACGTGATGATGGCACAAAAGGTTAACAGTGAGGAATGCAATGAGAAGACAAGTTCAGGGTCATTTGTGAAGGTTTCCATGGATGGAGCACCTTACCTACGCAAGGTGGACTTAACAATGTACAGATGCTACCAAGAATTAGCTGATGCTTTAGCCAAAATGTTTAGCTCCTTCACCATGGGTGATTATGGGACCCAAGGAATGATAGACTTCATGAATGAGAACAAGTTGATGGATCTCTTGAACAGTTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGACTGGATGCTTGTGGGTGATGTACCATGGGAGATGTTTGTTGGGTCATGCAAGCGTTTGCGAATAATGAAAGGATCAGAAGCAATTGGGCTTGCGCCAAGAGCCATGGAAAAATGCAAAAGCAGAAGCTGA 699 0.4549 MATTLLVKEHGLNLKETELCLGLPGGGSEVETPRANGKRGFSETVDLKLNLPSKEDLNENLKNVSKEKTLLNDPAKPPAKAQVVGWPPVRSYRKNVMMAQKVNSEECNEKTSSGSFVKVSMDGAPYLRKVDLTMYRCYQELADALAKMFSSFTMGDYGTQGMIDFMNENKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLAPRAMEKCKSRS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1079 232 ProSiteProfiles PB1 domain profile. 114 214 IPR000270 GO:0005515
Lan7g1079 232 SUPERFAMILY CAD & PB1 domains 108 213 - -
Lan7g1079 232 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 225 IPR003311 GO:0005634|GO:0006355
Lan7g1079 232 Pfam AUX/IAA family 35 223 IPR033389 -
Lan7g1079 232 Gene3D - 108 226 - -
Lan7g1079 232 PANTHER AUXIN-RESPONSIVE PROTEIN IAA7 8 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1079 Lan-Chr7 11879534 11882150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1079 105 217 B3 DNA Binding Superfamily AT2G46530 33.628 8.43e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lan7g1079 AUX_IAA 4.5e-81 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1079 K14484 - gmx:547949 412.535