Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1056 ATGGCGAAAGGTGACGATACGTTGCAAAAGAAGAAGAACAAAGCCCTCAGAAAGAGGAACAATCGCTCTTCCTCCGCTCTCTCCGTCAAGGTTTCCGCCGCTATTGCCGCCAAGAAACGCCGCAAGGCCGGAAAACGCCGCCTCTGCCAGGGGATGTGCTATAGCCTGCCTACTCCAGAAGATCCATTCAATGACCGTCATGGGAAAGAGGACTTCAAAACAAAGGGTCCTAAAAAGAAGACACTTCCCATGAAAGATGAAATGGTTCCTCTTATTGAGAAGGGTGCAACAAGAAGGAAAGGCTCACTTGATGTGAAAATTTCAAAGAAATCATATCATTTAGAAAAGGAAAACGAGTCTGACAAAGCCACCGATAATCTCTCAGAAAGTGAAAATACTGAGGAGACTGAGACGGAGGACGATCTTTCTGGTGCCCAACAGAACCATCGTGAAATTTCTGAGTTCCCTTCAAAGTTTGTTTTTTGGTGTCTAAGTTCAATTGAAAATGCATTACGAGAAGGTGATGCATACACTGATGGAGAGGGTAATTCATTGTTTGCTAATTCGTGGGGCTTAGAATTTTCCAAGTGTTATGCCACTGGGAAGGATGTGATGGAGACCAGTGGAAACTCTGCTACCAATGAGCAAATTGCATGGGTGATTTCTGGTGCAGCTGATACTTTTGTTGGTAAAGAGCTACAAGGCGTATCATTTTCCAGTCCCTTTCTTATATTCCTCGTGCCATCCCAAGAAAAAGCTACTCAGGTCCGGAAAGTTTGTAAGCCCTTGAAATCTATTGGAATACATACAGTTAGCATACATCCAGGTGCCTCATTAGATCATCAGATTGACGGTCTGAAAAGTTGTGAGCCTGAGTTTCTTGTTTCTACTCCTGAGAGGCTTTTGGAGCTTGTGTCTTTGAAGGCCATTGATATATCTGGTGTTTCCATGCTGGTTGTCGATGGGCTTAACGCTATTTGTAGTGCTGGCCACAGTGATACACTAAAATCTATCAAGAAGTTCATTTCTGGCAATCCTCGTCTTTTGGTTTTCAATGATTGCTTCAGCCATACATATATTGCAATGGTTCAGAATCTTCTTACAGGACCAATTTGTAGACTGTCTCTCAATAATTCAATTACCAGCCTAAGTTCATGCATTATCCAATCTGTTGAAGTGTGTACGTCAGAAGATAAACTTGTCAAGGGCATCCAAGCCCAACATCCATTTTGGAGCAGTCATACTCATAATTCAAGGCTGCTATATATTTTAAGAAAAGATGTCAAGTGTGATAAGTTGGTCAAGAATCTCAAATCTAAAGGTTGTTCTATCTCACCCGACTCTGAGAGTGTGGATTCGAACAGCAGAGTTTCTGTGGTTTATTTGGAGCATATCTTAACTACGGATATAGGGGTGTATGATGTGGTCATCCTACCTAGTTTTGTACCTTCAACGGACAGTTATGTCCATATTTTGACAAAGATGGCCCGCCAAAGTGTCAATGGGGTATTGCACAGTTACTTAACAAAAAGAGATACAGAACTTGCTGGACCGCTGGTCGAAATTCTTGAACAATGTGGGCAGAAAGTGCCTCCTACCCTGAAAAGTTTGCAGCATCAAACATGA 1626 0.4244 MAKGDDTLQKKKNKALRKRNNRSSSALSVKVSAAIAAKKRRKAGKRRLCQGMCYSLPTPEDPFNDRHGKEDFKTKGPKKKTLPMKDEMVPLIEKGATRRKGSLDVKISKKSYHLEKENESDKATDNLSESENTEETETEDDLSGAQQNHREISEFPSKFVFWCLSSIENALREGDAYTDGEGNSLFANSWGLEFSKCYATGKDVMETSGNSATNEQIAWVISGAADTFVGKELQGVSFSSPFLIFLVPSQEKATQVRKVCKPLKSIGIHTVSIHPGASLDHQIDGLKSCEPEFLVSTPERLLELVSLKAIDISGVSMLVVDGLNAICSAGHSDTLKSIKKFISGNPRLLVFNDCFSHTYIAMVQNLLTGPICRLSLNNSITSLSSCIIQSVEVCTSEDKLVKGIQAQHPFWSSHTHNSRLLYILRKDVKCDKLVKNLKSKGCSISPDSESVDSNSRVSVVYLEHILTTDIGVYDVVILPSFVPSTDSYVHILTKMARQSVNGVLHSYLTKRDTELAGPLVEILEQCGQKVPPTLKSLQHQT* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1056 541 MobiDBLite consensus disorder prediction 1 88 - -
Lan7g1056 541 Pfam DEAD/DEAH box helicase 239 342 IPR011545 GO:0003676|GO:0005524
Lan7g1056 541 Gene3D - 234 380 IPR027417 -
Lan7g1056 541 MobiDBLite consensus disorder prediction 113 149 - -
Lan7g1056 541 MobiDBLite consensus disorder prediction 62 88 - -
Lan7g1056 541 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 534 - -
Lan7g1056 541 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 ISOFORM X1 1 534 - -
Lan7g1056 541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 237 369 IPR027417 -
Lan7g1056 541 Coils Coil 113 133 - -
Lan7g1056 541 MobiDBLite consensus disorder prediction 113 129 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1056 222 537 Eukaryotic Initiation Factors Gene Family AT1G72730 20.120 9.48e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1056 - - pvu:PHAVU_007G245100g 692.575