Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1052 ATGGATTCTGTGGAGAGGGTATCAGAAAAGTGCTTAGATTCTCAATTATGGCATGCTTGTGCTGGTTCCATGGTTCAAATGCCACATATCAACTCAAAAGTATTCTACTTTCCACAGGGCCATGCAGAACATGCCCTTGGCAAAGTAGATTTTGGGAACACACCAATTCCCCCACTCATCCCTTGCAAGGTTGATGCTATGAAATTTATGGCAGACCTTGGCACTGATGAGGTTTATGTGAAGGTGAGGTTAACCCCTTTGAGAGAAAATGAATTTGATTTGGAAGATGATTGTTTCAAAGGGATTAGAGGAGTTGTTGAGAGTCAAGAGAAAACATCTTCATTTTCCAAGACATTGACTCAATCTGATGCCAACAATGGTGGAGGGTTTTCGGTGCCGCGCTACTGCGCTGAGACTATTTTCCCAAAGTTGGATTACTCTGCTGACCCTCCTGTTCAAACCATCATTGCCAAGGATGTGCATGGACAGTGCTGGAAGTTTCGGCATATCTATAGAGGGACGCCGAGGAGGCATCTTTTGACCACCGGATGGAGCAATTTCGTGAACCAGAAGAAGCTTGTTGCTGGTGATTCTATAGTGTTTTTGAGGGCTGACAACGGCGATCTTTGTGTCGGGATAAGGAGGGCTAAGAAAGGGATTGGTAGTGAGTTCATGTCATCCGGTTGGAACAACAACCAATTGGCACCTTTATTATTTGGCGGTGCGAATGAGAACAAGATGTTGATGAGGAGAAAATATGGTGCGGAATTGATGGGAAAAGTGGCAGCTGAATCCGTTGTTGAAGCTGTGACTTGTGCTGTTAATGGTAGACCATTTGAGGTTGTTTACTATCCAAGGGGTAGCACCCCTGAGTATTGTGTTAAGGCCTCTGCTGTGAGGGCTGCATTGCAAATACAATGGTGTTCTGGGATGAGATTCAAGATGCCCTTTGAAACTGAGGATTCTTCTAGGATCAGCTGGTTCATGGGAACCATATCTTCTGTCCATGTTGTTGATCCCATTCGCTGGCCTAATTCGCCGTGGCGGCTTCTGCAGGTGGTGTGGGATGAACCAGATTTACTCCAAAATGTCAAGTGTGTAAATCCTTGGTTGGTTGAGCTAGTCTCAAACATCCCTAATTTCAACCTTTCTCCATTCTCGCCACCAAGAAAGAAACCGAGGTTTCCGCAGACACCAGATTTTCACCACATCAACCAACTTCCAATGCCGTCATTTTACAACAACCGTCTCAACCATACTAACTCTGTATGTAACATTCGAGGCAATAGTTCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGACTGACTCCATCCGATTTCCCCTTCAACAAACAGCAAACAGATGCGTTGTTTCCCGGTGCACTTCCATGGCTTAATCGTTCATCACAACCTATTAGACCTCCTCATGACGCCTACAAGACTGAGAATAATGTTGATATATCATGCTTGTTGACTATGGGAAATCCAGGCCAGAGTTTGAAGGAACCCGTTAAAGCGAAATCACCTCACATCTTGTTGTTCGGACAACTCATACAAACTGAACAGCATGATTCTAACATCATGTCCACTAGTACAAACGAGAATAGTTCAACTAACGCTACTTCGCGAAAGACTTCAAATGCTTCTGACAGCTTGAGTTCAGACTTACTTCAAAATAGTCCAATGGAGAAGAATTCATCTGATGAAGGGTCTCCCCAGTACAAAGATCAGCAAAAATCTGATCTTCGAACCGAAAACGTTAACCGATTGTGTTTGGCAATGTGA 1791 0.4439 MDSVERVSEKCLDSQLWHACAGSMVQMPHINSKVFYFPQGHAEHALGKVDFGNTPIPPLIPCKVDAMKFMADLGTDEVYVKVRLTPLRENEFDLEDDCFKGIRGVVESQEKTSSFSKTLTQSDANNGGGFSVPRYCAETIFPKLDYSADPPVQTIIAKDVHGQCWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKKGIGSEFMSSGWNNNQLAPLLFGGANENKMLMRRKYGAELMGKVAAESVVEAVTCAVNGRPFEVVYYPRGSTPEYCVKASAVRAALQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVVDPIRWPNSPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNIPNFNLSPFSPPRKKPRFPQTPDFHHINQLPMPSFYNNRLNHTNSVCNIRGNSSAGIQGARHAQFGLTPSDFPFNKQQTDALFPGALPWLNRSSQPIRPPHDAYKTENNVDISCLLTMGNPGQSLKEPVKAKSPHILLFGQLIQTEQHDSNIMSTSTNENSSTNATSRKTSNASDSLSSDLLQNSPMEKNSSDEGSPQYKDQQKSDLRTENVNRLCLAM* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1052 596 MobiDBLite consensus disorder prediction 529 575 - -
Lan7g1052 596 Gene3D - 113 217 IPR015300 -
Lan7g1052 596 SUPERFAMILY DNA-binding pseudobarrel domain 107 217 IPR015300 -
Lan7g1052 596 MobiDBLite consensus disorder prediction 529 589 - -
Lan7g1052 596 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 563 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan7g1052 596 PANTHER AUXIN RESPONSE FACTOR 16 6 563 - -
Lan7g1052 596 CDD B3_DNA 114 215 IPR003340 GO:0003677
Lan7g1052 596 Pfam Auxin response factor 269 352 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan7g1052 596 SMART B3_2 115 217 IPR003340 GO:0003677
Lan7g1052 596 Gene3D - 306 380 - -
Lan7g1052 596 Pfam B3 DNA binding domain 115 216 IPR003340 GO:0003677
Lan7g1052 596 ProSiteProfiles B3 DNA-binding domain profile. 115 217 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1052 Lan-Chr7 11194120 11197436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1052 1 574 B3 DNA Binding Superfamily AT4G30080 56.000 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan7g1052 B3 2.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1052 - - gmx:100803053 842.417