Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1047 ATGGATTCACAAAGGAGTCTATGTACTAACACCTGGGCAAGGTCGTCGTCGTCCTTACCCGCTCCCGGGAATGGATTGCAGACAAATATATCCTTAAATCCTCCCTCTCTCCTTGATTTTGGTTTTCAAAATAATCAAAACAAATGGGATGATTCCTCTATGTCAGATTATGGGGTCAGGGTAGAAGCAGCTTTCAAAGAGTTTAACCAGTCCTCTCAAAAAGGCCAACCTCCATTTCCGTATGACTCCAACAATCAAATTAAGAACCCCGATCAAGAAAGTCGCCTGCCGAGTGACTCGTCACAAACCTTTAGACTCCCGGATTGGGATCCGTGTGCGATGTTGAATAACCTTTCGTTCCTAGAGGACAAGATCCATCAGCTCCAGGATCTAGTGCGCTTGATTGTTAGTCAAAAAGGCCAACTTTTTGGACATCCTACTCAACATGTTACTCAGGAACAGCAGCTCGTGACAGCTGATCTTACGTCGGTTATTGTTCAATTGATCTCAACTGCAGGTAGCCTTCTCCCTTCTGTCAGGCATACCCTTTCAAACAGTAGTCCATTGGTTGGACAGCTTAACCAGCTTCATGAGATTACCACCCCCTCTGCATCCGGCTCGAGAAGTATTCAACCACAAAATAATAGTAGCAATAAATTGCCTGATCAATCCATTCCTAGTAATTGTAAAATGGAACTAAACTGCAATATGGAAGAACATGAATTAAGAGATGAAGAGGATGCAGAAGATGGAGAAAACCTTCCGCCCGGTTCCTATGAGATTTTACAATTACAAAAAGAAGAAATCCTCGCGCCTCACACACATTTCTGTACTATTTGTGGGAAGGGATTCAAGAGAGATGCAAATCTTCGAATGCATATGCGAGGACATGGTGATGAGTACAAAACCCCGGCAGCACTCGCAAAACCACACAAAGAATCTGGTTCTCAACCACAGCTTATCAAGAGATATTCATGCCCTTATGGCGGCTGCAAGCGTAACAAGGAGCACAAGAAGTTCCAACCTCTGAAGACTATTTTATGTGTCAAAAACCATTACAAAAGAACACACTGTGACAAGAGTTACATTTGCAGCAGATGCAACACCAAGAAGTTTTCAGTTATGGCAGATCTTAAAACTCATGAAAAACATTGTGGTAAGGATAAATGGCTTTGTTCATGTGGCACAACATTTTCCAGGAAAGACAAGCTTTTCGGACACATCGCGCTCTTCCAAGGCCATACACCAGCCGTTCCCTTCGATGACACTAGAGTACCGGCTTCGGCGCCTGATCAGGACTGCGATAAAAGCAATAAGGAAGGAAGTATGAATTTCAGTTTTGGATCAAATCATTCAAGTGGAAATGGAGTTCAAAATGCCAGGGATGTGAAAGGAAGTATTGATGTTCCTATAAATTATTTCTCATCAAACTTTGAAACTAACTTTGGTGGGTTTAGTGAATTCACTCAACCTCCATTTGAAGACTCAGAAACTTCTTTCTCTTTTCTCATGCCTGGAGGAGAATCAAGTTCTGACAATCTTTTGTAA 1548 0.4238 MDSQRSLCTNTWARSSSSLPAPGNGLQTNISLNPPSLLDFGFQNNQNKWDDSSMSDYGVRVEAAFKEFNQSSQKGQPPFPYDSNNQIKNPDQESRLPSDSSQTFRLPDWDPCAMLNNLSFLEDKIHQLQDLVRLIVSQKGQLFGHPTQHVTQEQQLVTADLTSVIVQLISTAGSLLPSVRHTLSNSSPLVGQLNQLHEITTPSASGSRSIQPQNNSSNKLPDQSIPSNCKMELNCNMEEHELRDEEDAEDGENLPPGSYEILQLQKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKESGSQPQLIKRYSCPYGGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSYICSRCNTKKFSVMADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAVPFDDTRVPASAPDQDCDKSNKEGSMNFSFGSNHSSGNGVQNARDVKGSIDVPINYFSSNFETNFGGFSEFTQPPFEDSETSFSFLMPGGESSSDNLL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1047 515 ProSiteProfiles Zinc finger C2H2 type domain profile. 275 302 IPR013087 -
Lan7g1047 515 Gene3D Classic Zinc Finger 259 329 - -
Lan7g1047 515 MobiDBLite consensus disorder prediction 1 30 - -
Lan7g1047 515 ProSitePatterns Zinc finger C2H2 type domain signature. 277 297 IPR013087 -
Lan7g1047 515 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 1 507 - -
Lan7g1047 515 MobiDBLite consensus disorder prediction 202 227 - -
Lan7g1047 515 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 1 507 IPR044300 GO:0010044|GO:0010447
Lan7g1047 515 MobiDBLite consensus disorder prediction 69 102 - -
Lan7g1047 515 SUPERFAMILY beta-beta-alpha zinc fingers 273 300 IPR036236 -
Lan7g1047 515 SMART c2h2final6 324 357 IPR013087 -
Lan7g1047 515 SMART c2h2final6 362 384 IPR013087 -
Lan7g1047 515 SMART c2h2final6 275 297 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1047 Lan-Chr7 11130693 11133739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1047 242 515 C2H2 Transcription Factor Family AT1G34370 67.128 1.60e-133 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan7g1047 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1047 - - gmx:100500526 700.279