Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1043 ATGGAAGATTCAGAGGAAGATGAGCTTCTGAATCTTACCCTTTCAGTTTCTTCTGGTAGGGAAAGGAAAAAGAAGGGAAAGACAATTAGGGCTAATAATGCTAACTCTATTATTAGTCCTACGATGAACTCCTCCTATGAAGGAAACATCTTTAGGGTCCTCCAAATTAGGGAGCACATGCTAAGACAAGACCTTCACCACATAAAGAAAGGAGTGGTTGAAGATGGTAATGGCCTCTCTCTGATTCGCTTGCTCCTCAAAACTGCCACTGCTGTTGATGAGGACAACTATGGTGCAGCACTAGAGAATCTCACAGAACTTTATCAAACAGTTTCCTTAACTGGTGACTCAGTTCAAAGAGTTGTGGCCTATTTTTCTGATGGTCTTGCTGCAAGGATTCTCACAAGGAAATCACCATTCTATGACATGCTCATGGAGGAACCAACAAGTGAGGAAGAGTTTCTAGCTTTCACAGATCTCTATAGGGTTTCACCTTATTACCAATTTGCACATTTCACTGCAAACCAAGCAATCTTAGAAGCATTTGAGGCTGAAGAAGAAAGGAACAACCGTGCACTACATGTCATAGACTTTGATGTCTCCTATGGTTTTCAATGGCCTTGTCTTATTCAATCACTTTCTGAGAAGGCTACAAGTGGAAACCGCATATCACTCAGGATAACAGGATTTGGCAACAACATGAAAGAGCTGCAAGAAACTGAGTCTAGATTGGTAAGCTTCTCAAAAGGTTTTAGTAACCTTGTGTTTGAGTTCCAATGGTTGTTAAGAGGGTCAAGGGTTATTAACTTAAGGAAAAAGAAAAATGAAACTGTGGCTGTGAGCTTGGTTTCTTATTTAAACACTTTGAGTAGTTTTATGAAGATCTCTGACACATTGGAATTTGTTCATTCTCTTAGACCCTCAATTGTAGTGTTGGTGAAACAAGAAGGTAGCAAGGGTGTTAGGACTTTCTTGTCAAGGTTCACTGAGTCTTTGCACTACTTTGCAGCCATGTTTGATTCACTTGATGATTGTCTTCCACTTGAGAGCACTGAAAGGCTAAGGATTGAGAAGAAGCTTCTAGGTAAAGAGATAAAAAATGTTCTAAACTATGACATGGATAATGGTTTGGATTGTACAAAATATGAGAGAATGGAATCATTAAAAGTAAGAATGAAGCATCATGGTTTTGTTGGAACAAAAATAAGCTCAAAGAGTATGATCCAAGCAAAACTACTTTTAAAGATGAGGACCCATTATTGTCCACTTCAGATTGATGAAGAGGGTGGTGGTGGTGGTGGTTTCAGGATTTGTGAAAGGGATGAAGGAAGAGCAATCTCTTTGGGGTGGCAAGATAGATTTCTTCTTACTGTTTCACCATGGCAACCACTCTGA 1395 0.3957 MEDSEEDELLNLTLSVSSGRERKKKGKTIRANNANSIISPTMNSSYEGNIFRVLQIREHMLRQDLHHIKKGVVEDGNGLSLIRLLLKTATAVDEDNYGAALENLTELYQTVSLTGDSVQRVVAYFSDGLAARILTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEAEEERNNRALHVIDFDVSYGFQWPCLIQSLSEKATSGNRISLRITGFGNNMKELQETESRLVSFSKGFSNLVFEFQWLLRGSRVINLRKKKNETVAVSLVSYLNTLSSFMKISDTLEFVHSLRPSIVVLVKQEGSKGVRTFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKNVLNYDMDNGLDCTKYERMESLKVRMKHHGFVGTKISSKSMIQAKLLLKMRTHYCPLQIDEEGGGGGGFRICERDEGRAISLGWQDRFLLTVSPWQPL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1043 464 Pfam GRAS domain family 81 462 IPR005202 -
Lan7g1043 464 PANTHER OSJNBA0084A10.13 PROTEIN 8 462 - -
Lan7g1043 464 ProSiteProfiles GRAS family profile. 72 462 IPR005202 -
Lan7g1043 464 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 462 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1043 Lan-Chr7 11111671 11113241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1043 35 463 GRAS Transcription Factor Family AT3G54220 34.163 1.25e-53 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan7g1043 GRAS 9.1e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1043 - - gmx:100813979 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1043 7 11111671 11113241 Lan8g0731 8 9560170 9561699 PCT
Lan8g0731 8 9560170 9561699 Lan7g1043 7 11111671 11113241 PCT