Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1038 ATGGAAAATTTTCCAACCAAAGATCTAACAACCTCATCCCTCAATGTCGAGAGCCAAGAACCAGCACCTAGTCCTCTCCGAAAAATGGTCGCCGTGGCTTCCATTGCCGCCGGTGTTCAATTCGGGTGGGCCCTACAACTCTCTCTATTAACCCCATATGTGCAGTTATTAGGGGTCCCACATACATGGTCCTCCATTATTTGGCTTTGTGGCCCAATCTCCGGTCTAGTTGTTCAACCCATCGCCGGCTACTATAGTGACCGTTGCAAATCCCGATTTGGTCGCCGCCGTCCTTTCATTTGTGCCGGTGCTATTGCCGTTGCCATCTCCATTATCCTTATCGGGTTCGCCGCGGATTTCGGACACAGTTTAGGAGATGACCTTACTTTGAAGACTCGCCCACGCGCCGTTGCTTTTTTTGTAATCGGATTTTGGATCCTTGACATGGCTAATAACATGTTGCAAGGACCTTGCCGTGCTTTCCTCGGAGATCTCTCCGCCGGAAACCAGAGCAAGATCCGTACAGCAAATTCAATCTTTTCATTCTTCATGGCTGTCGGGAACATCCTCGGCTATGCTGCTGGGTCGTACAGCAAACTTTACAAGGTTTTCCCATTCACGGAAACCAAGGCATGCGATATTTATTGCGCTAATCTTAAGAGTTGTTTCTTTATATCTATTGTCCTCTTGATTGTTCTTGTCATCATTGTGCTAGTGTACGTAAAGGAGATACCCCTGACGTCATCGGCCATAGTTGATGACGAGAACAAGGAAGGGACAACAACCCTATGTATTGGGTCATTATTTGGCGCATTTAGAGAATTGAAGCGCCCGATGTGGATGTTGTTATTGGTGACATGTTTGAATTGGATGGCGTGGTTCCCATGGGTTCTTTATGACACTGATTGGATGGGTAAGGAGGTGTATGGTGGTGATGTTGGACAATCAGTGTATGATAAGGGTGTTCATGCTGGTTCTTTGGGTCTCATGTTTAATTCTATTGTTTTGGCTGTGATGTCTTTGGCTATAGAGCCATTGTCACGTCTTCTTGGTGGAGTAAAGAGGTTGTGGGGTATGGTTAACTTTATTCTAGCTATTGGTTTAGCAATGACTGTCCTCATTACTAAGCAAGCTGAGGCCCACCGCCAATTCACGGTGGCTGCCAATGGTGTTAGGGAGGCTCTGCCGCCGCCAGCTAGTGTCAAGGGTGGTGCCTTGGGGTTATTTTCCGTTCTTGGCATTCCTCTTGCGGTAACATACAGTGTACCATTTGCTCTGGCATCTATATTCTCCAGCACTTCAGGAGCAGGCCAAGGTTTATCATTGGGAACTCTCAATCTTGCAATTGTAATTCCACAGATGATTGTATCAGCAATAAGTGGACCGCTCGACGGTGCATTTGGCGGTGGCAACTTGCCGGCGTTTGTGATGGGCTCCATATTTGCGGCCGTGAGTGGTGTATTGTCAATTGTATTGTTGCCAACACCTCAGCCACAGGAATTGGCCAAGGCTGCAACAGTTGGTGGTTTTCACTAG 1536 0.474 MENFPTKDLTTSSLNVESQEPAPSPLRKMVAVASIAAGVQFGWALQLSLLTPYVQLLGVPHTWSSIIWLCGPISGLVVQPIAGYYSDRCKSRFGRRRPFICAGAIAVAISIILIGFAADFGHSLGDDLTLKTRPRAVAFFVIGFWILDMANNMLQGPCRAFLGDLSAGNQSKIRTANSIFSFFMAVGNILGYAAGSYSKLYKVFPFTETKACDIYCANLKSCFFISIVLLIVLVIIVLVYVKEIPLTSSAIVDDENKEGTTTLCIGSLFGAFRELKRPMWMLLLVTCLNWMAWFPWVLYDTDWMGKEVYGGDVGQSVYDKGVHAGSLGLMFNSIVLAVMSLAIEPLSRLLGGVKRLWGMVNFILAIGLAMTVLITKQAEAHRQFTVAANGVREALPPPASVKGGALGLFSVLGIPLAVTYSVPFALASIFSSTSGAGQGLSLGTLNLAIVIPQMIVSAISGPLDGAFGGGNLPAFVMGSIFAAVSGVLSIVLLPTPQPQELAKAATVGGFH* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1038 511 PANTHER SUGAR TRANSPORTER 13 501 - -
Lan7g1038 511 TIGRFAM GPH_sucrose: sucrose/H+ symporter 25 497 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lan7g1038 511 MobiDBLite consensus disorder prediction 1 20 - -
Lan7g1038 511 MobiDBLite consensus disorder prediction 1 21 - -
Lan7g1038 511 Gene3D MFS general substrate transporter like domains 22 496 IPR036259 -
Lan7g1038 511 CDD MFS_SLC45_SUC 29 488 - -
Lan7g1038 511 SUPERFAMILY MFS general substrate transporter 28 501 IPR036259 -
Lan7g1038 511 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 13 501 - -
Lan7g1038 511 Pfam MFS/sugar transport protein 35 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1038 Lan-Chr7 11029855 11032584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1038 1 511 Sucrose Transporter Gene Family AT1G22710 61.612 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1038 K15378 - gmx:547679 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0742 8 9641183 9644166 Lan7g1038 7 11029855 11032584 PCT
Lan20g0111 20 668817 671340 Lan7g1038 7 11029855 11032584 PCT
Lan4g1793 4 26562947 26566399 Lan7g1038 7 11029855 11032584 PCT