Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1009 ATGTTGGGGGACTCAGCTTTGTTAGGAACAGGAGGAGGAGGTGGTGGTAACTCTGTTGATGCAGTAGCTGCTGCATCAGTGGTAGCAGTTGCAGGATCAGCTCATGAGAGTGGTGCTGACACCGCACTCAGCGGCGACGGAGGTGGTGGTGGAGGATCAATTTCAGGAGATGATGACAGAGGTAGAGGGGAGGAAGGTGACCGGAGCTTTGGTGGCAACAGGTGGCCAAGACAGGAGACTCTTGCTTTGTTGAAAATAAGGTCAGATATGGACGTGGTGTTTAGAGGTTCAAGTGTTAAGGGTCCCTTGTGGGAAGAGGTTTCAAGGAAGCTGGCAGAACTTGGGTACCACAGAAATTCTAAGAAGTGCAAAGAGAAATTTGAAAATGTTTACAAGTACCACAAGAGAACAAAGGAAGGTAGAAGTGGAAAATCATATGGCAAAACTTATAGATTCTTTGATCAATTACAAGCACTTGAAGGAAATAACCACACTGCAAAAACAACTAATCAATCTTCACCACCTTCAAAACCACCACAAACAACAGCACCATTACAAGCAACACCGGTTTCAATAGTGGTGACTGCTTCATCATTACCACATCAAATTCCAACCACAACAACAATGCCAATGTTTGCAGCTTCTAACACCACTAATCTAAACAGTGTGAGTGTTCCTTTTTCACATGCCACCAATGTTCCATCAACAACACTCCCTATATCAATTCCTCAACCCATTCTCAAGACTACTATTGCTACTACCCCATCAATAAACCACCCAATCCCTTCTTTCCCACCACCACAAAACCCTACACATTTCAACCCATCATTAACAACAAACCCTACAATTAACCCTTCTCATGTTAACAATAGTAACCCAATTTCTTTTCCCAACATACCAATGGATCTCTTGCCCAACTCCAGTTCTTCTTCAACTTCCTCTGATGAAACATTCCAAGGAAGGCGCAAGCGGAAGAGGAAATTGAATGACTTCTTTGAGAGAATAATGAAAGAGGTGATTGAGAAGCAGGAAGAGCTCCAAAAGAGGTTCTTGGAAGCCATAGAGAAGCGGGAGCAAGAGTGGTCTGCTAGAGAAGATGCATGGAGGATGCAAGAGATGCAAAGGATCAATAGTGAAAGGGAAATTCTAGCACAAGAAAGATCCATGGCTGCTGCAAAAGATGCAGCCGTAATTGCATTATTTCAGAAAATAGCTGAACAACAAAATCTTGGGCAAGCTTTGAATAACATTAATATTTCATCACAACAACATGCGCCACCGGCAACTACACCAGCAGCGGTGCCAGCACCAACACAGTTTCCAATGCCTGCACCAGCACAGACATTGGAGCAACCAATGGAACTGGTGGTATTGGCCCCACAACAACATGAACATGAGCAACAGCAACAAGTGAGTAACATTGAAATTGTGAAAGCTAATAATGGTGATAATATGATGAGAGCAAGTTCTCCCAGGTGGCCAAAAGTGGAAATTTTGGCACTGATAAAGCTGAGAACAAGCATGGATGACAAGTACCAGGAAAATGGACCAAAGGGGGCACTATGGGAAGAGATATCATCCTTGATGAAGAAGCATGGGTACAACCGAAGTGCCAAAAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTATTACAAGAAAGTGAAAGAAAGCCATAAGAAGAGGCCAGAAGATTCCAAGACCTGTCCATACTTTCACGAGCTGGATGCTCTATACAGGGAGAGGAGAAATGTACAGAACTCAATGAACCACGACAGCATGATGCCGCTGCTCATGGTGCAGCCGGAGCAGCAATGGCCTCCTCAGCAACCGCCACCTTCAGCCCTGCCGGACCTGACTATGGAAGATGCGCAGAATGACCCCATGAACAACCAGCAACACAATGAGGAAGATAATGATGATGATGACAAGAACATGGATGATGATGAAGGTGAAGAGGATGATGAAGGTGATAAATATGAGATAGTGGCAAGCAAGTCAGATTCAGTGGGTGCATCTGCTGAGTGA 2028 0.4453 MLGDSALLGTGGGGGGNSVDAVAAASVVAVAGSAHESGADTALSGDGGGGGGSISGDDDRGRGEEGDRSFGGNRWPRQETLALLKIRSDMDVVFRGSSVKGPLWEEVSRKLAELGYHRNSKKCKEKFENVYKYHKRTKEGRSGKSYGKTYRFFDQLQALEGNNHTAKTTNQSSPPSKPPQTTAPLQATPVSIVVTASSLPHQIPTTTTMPMFAASNTTNLNSVSVPFSHATNVPSTTLPISIPQPILKTTIATTPSINHPIPSFPPPQNPTHFNPSLTTNPTINPSHVNNSNPISFPNIPMDLLPNSSSSSTSSDETFQGRRKRKRKLNDFFERIMKEVIEKQEELQKRFLEAIEKREQEWSAREDAWRMQEMQRINSEREILAQERSMAAAKDAAVIALFQKIAEQQNLGQALNNINISSQQHAPPATTPAAVPAPTQFPMPAPAQTLEQPMELVVLAPQQHEHEQQQQVSNIEIVKANNGDNMMRASSPRWPKVEILALIKLRTSMDDKYQENGPKGALWEEISSLMKKHGYNRSAKRCKEKWENINKYYKKVKESHKKRPEDSKTCPYFHELDALYRERRNVQNSMNHDSMMPLLMVQPEQQWPPQQPPPSALPDLTMEDAQNDPMNNQQHNEEDNDDDDKNMDDDEGEEDDEGDKYEIVASKSDSVGASAE* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1009 675 MobiDBLite consensus disorder prediction 273 316 - -
Lan7g1009 675 ProSiteProfiles Myb-like domain profile. 73 131 IPR001005 -
Lan7g1009 675 ProSiteProfiles Myb-like domain profile. 492 549 IPR001005 -
Lan7g1009 675 MobiDBLite consensus disorder prediction 604 675 - -
Lan7g1009 675 MobiDBLite consensus disorder prediction 165 184 - -
Lan7g1009 675 MobiDBLite consensus disorder prediction 36 74 - -
Lan7g1009 675 Coils Coil 329 360 - -
Lan7g1009 675 CDD GT1 73 138 - -
Lan7g1009 675 Gene3D - 75 136 - -
Lan7g1009 675 Gene3D - 493 554 - -
Lan7g1009 675 MobiDBLite consensus disorder prediction 57 72 - -
Lan7g1009 675 CDD GT1 491 556 - -
Lan7g1009 675 MobiDBLite consensus disorder prediction 640 658 - -
Lan7g1009 675 MobiDBLite consensus disorder prediction 269 323 - -
Lan7g1009 675 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 29 666 - -
Lan7g1009 675 Pfam Myb/SANT-like DNA-binding domain 491 578 IPR044822 -
Lan7g1009 675 Pfam Myb/SANT-like DNA-binding domain 73 159 IPR044822 -
Lan7g1009 675 SMART sant 489 551 IPR001005 -
Lan7g1009 675 SMART sant 71 133 IPR001005 -
Lan7g1009 675 PANTHER - 29 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1009 Lan-Chr7 10274467 10278041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1009 71 605 Trihelix Transcription Factor Family AT1G76890 43.986 1.27e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan7g1009 Myb_DNA-bind_4 1.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1009 - - lang:109354958 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1009 7 10274467 10278041 Lan8g1206 8 17779334 17783028 LSH
Lan7g1009 7 10274467 10278041 Lan8g0764 8 9805310 9807922 PCT
Lan7g1009 7 10274467 10278041 Lan4g1824 4 26797561 26800383 PCT
Lan8g0764 8 9805310 9807922 Lan7g1009 7 10274467 10278041 PCT
Lan4g1824 4 26797561 26800383 Lan7g1009 7 10274467 10278041 PCT