Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1008 ATGGAAGGGAATTTGTCACAGGGAGGTATGATTCAAGGTGAGACTTCTTTTGGCGGTTTTGATTTCCCTGAACCAATGTGGGTTCATTGTTTAGCAAATAATCCAAATACCATGAACCAACATGAAACTCATCCTTGTGGAGGGTCTTCAGTGCATCCCTCAGTTAACGAGGGTTTTCCGATTACACTGGAAACCTTGCAGAACTGTGACCAGACTATGTCAGCGAAGTTTAGCAAGGGGGATATAAGCAGAAATTCATCAAGTGATGAAGATGAGCCAAGCTTTAATGAGGGCGACGGTGAAGGTCGTTATGAAGTGGCTAGAGGGAAAACGGGGTCACCTTGGCAGCGGATGAAGTGGACTGACAAGATGGTACGGCTTATGATAACAGCAGTTTCTTACATAGGTGAGGACACAATTTTTGATGATGGTGGCGGAAGAAGAAAATTTGCAGTCATACAGAAAAAGGGTAAGTGGAAATGTATTTCCAAGGTCATGGCTGAAAGGGGTTATCATGTTTCACCTCAGCAATGTGAGGATAAATTCAATGACCTTAATAAAAGGTATAAAAAACTTAATGATATGCTTGGTAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCGGCACTGTTGGATGTGATAGATTATCTTACCGAGAAAGAAAAGGATGATGTTCGCAAAACATTAAGCTCAAAACACCTGTTCTATGAAGAGATGTGTTCTTACAATAATAAAAATAGATTGCATTTACCCCATGATCCTGCATTGCAGCGCTCACTACAGGCCGCTCTCAGAAATAGAGATGACCATAATAATGATGATATCAGAAGGTCTAATCATGATGAAGACGATGAAGATATGGAAACTGGAGATCAAGACTTTACAGATAATTATGCTTCCCATGGAGATAGTAGAGGAATGCATAACCCACTAGGAGGAGCTATGAATAAATTGAGACAAGGGCAAGGCCAAGACGATGCTACTACATATGTGAATTCTTTAAACTGTCAAGAGCACAACAAAAATTTATATCCCCATGGACAGATGATGGTCCAGTCTGACATGAATCAAGCTTTACATGAAAGCACGAGAGCAACTTGGTTACAACAGAAGCGATGGACCGAATCTCGCTCACTTCAGTTAGAAGAACAGAAGCTACAAATTCAGGTCGACATGTTGGAACTAGAGAAACAGAGATACAAGTGGCAGAAATTCAGTCAGAAAAAAGACCGACAGTTGGAGAAGTTGAGAATGGAGAATGCAAGAATGAAACTTGAAAATGATCTTATTGCTTTAGAGCTGAAGCGAAAGGAAATGGACTCCGACTTTAATTAG 1335 0.4075 MEGNLSQGGMIQGETSFGGFDFPEPMWVHCLANNPNTMNQHETHPCGGSSVHPSVNEGFPITLETLQNCDQTMSAKFSKGDISRNSSSDEDEPSFNEGDGEGRYEVARGKTGSPWQRMKWTDKMVRLMITAVSYIGEDTIFDDGGGRRKFAVIQKKGKWKCISKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIDYLTEKEKDDVRKTLSSKHLFYEEMCSYNNKNRLHLPHDPALQRSLQAALRNRDDHNNDDIRRSNHDEDDEDMETGDQDFTDNYASHGDSRGMHNPLGGAMNKLRQGQGQDDATTYVNSLNCQEHNKNLYPHGQMMVQSDMNQALHESTRATWLQQKRWTESRSLQLEEQKLQIQVDMLELEKQRYKWQKFSQKKDRQLEKLRMENARMKLENDLIALELKRKEMDSDFN* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1008 444 Gene3D - 120 191 - -
Lan7g1008 444 MobiDBLite consensus disorder prediction 83 106 - -
Lan7g1008 444 MobiDBLite consensus disorder prediction 78 111 - -
Lan7g1008 444 Coils Coil 376 403 - -
Lan7g1008 444 MobiDBLite consensus disorder prediction 265 324 - -
Lan7g1008 444 MobiDBLite consensus disorder prediction 265 283 - -
Lan7g1008 444 Coils Coil 406 442 - -
Lan7g1008 444 Pfam Myb/SANT-like DNA-binding domain 117 242 IPR044822 -
Lan7g1008 444 PANTHER FACTOR, PUTATIVE-RELATED 1 444 - -
Lan7g1008 444 PANTHER F16F4.11 PROTEIN-RELATED 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1008 Lan-Chr7 10158149 10161631 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan7g1008 Myb_DNA-bind_4 3.5e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1008 - - gmx:100812134 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1008 7 10158149 10161631 Lan8g1208 8 17839490 17842977 LSH
Lan7g1008 7 10158149 10161631 Lan8g0766 8 9829983 9832294 PCT
Lan7g1008 7 10158149 10161631 Lan4g1826 4 26827304 26829565 PCT
Lan8g0766 8 9829983 9832294 Lan7g1008 7 10158149 10161631 PCT
Lan4g1826 4 26827304 26829565 Lan7g1008 7 10158149 10161631 PCT