Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1003 ATGGACCTGAACTGCATCGGAAAGGTTCCGGCGACGGTGGACATAGATAGGATGCCGGAGCGTGGGTCCCACCACCGGAGGTCCCACTCCGATACCAGCTTCCGTGTAGCCACCAACTTCGACGACCTCCTTCTTTTCGACCCTTCCGACTTCGACATCTCCACCTTCCCCCTCCCATCCCCAACCACCTCCGGCGGCGGCGTCGCCGGTGCCTGCGCCTCCGTCCCGATGACTATCGACTCGGACGAGTCGAGCGGCCAGAGTTCACGACCGAGGCCGGTGGATGCCCCAGGTGGCGGCCACCTCCGGAGCTTGTCCGTAGACTCCGATTTCTTTGATAGCCTTGGGTTCGCCGGCGGCGGCGACGAGAAATTTGGCGGGAGAAGGGTGGGGCATCACCGCAGTAACTCGATGGATGGGTCTCCAACGACGTCGTTTGAGGAGTGTGTGAAGAAGGCCATGGCACCTGATAAGCTCGCTGAGCTTGCTCGTATTGATCCCAAGAGAGCTAAGAGGGTTCTTGCTAACAGGCAATCGGCTGCTCGATCAAAGGAAAGGAAAGTTCGTTATACGAGTGAGCTGGAGAAGAGGGTGCAGACGCTTCAGACAGAAGCAACTAACCTCTCTGCACAGCTTACCATGCTTCAGAGAGACACTACCGACTTGGCTGCTCATAATAAGGAGCTAAAATTGAAATTGGAGGCTTTGGAACAAGAAGCACAGCTTAGAGAAGATCTCAATGCGGCATTGAAAGAAGAGCTGCAGCGACTTAGGGAGCAAAATATCCGTCTCAGTGCTATTTCTGGTAACACTTCTTTTGTTGGAATGTTCAACCAATTGGCATCTCAACTAGCAATGCAACAGTTGACTAATCCTCCACCCCAGCAGCCACAGCCTAGGATGCCCCCTCCTCCCTCCGATCAGCCATTTAACGAGCAGCGCGGTCCTAACTTCACGGACTTCAACAAGCAGAAGTAA 978 0.5481 MDLNCIGKVPATVDIDRMPERGSHHRRSHSDTSFRVATNFDDLLLFDPSDFDISTFPLPSPTTSGGGVAGACASVPMTIDSDESSGQSSRPRPVDAPGGGHLRSLSVDSDFFDSLGFAGGGDEKFGGRRVGHHRSNSMDGSPTTSFEECVKKAMAPDKLAELARIDPKRAKRVLANRQSAARSKERKVRYTSELEKRVQTLQTEATNLSAQLTMLQRDTTDLAAHNKELKLKLEALEQEAQLREDLNAALKEELQRLREQNIRLSAISGNTSFVGMFNQLASQLAMQQLTNPPPQQPQPRMPPPPSDQPFNEQRGPNFTDFNKQK* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1003 325 Gene3D - 167 221 - -
Lan7g1003 325 Pfam bZIP transcription factor 168 222 IPR004827 GO:0003700|GO:0006355
Lan7g1003 325 SMART brlzneu 164 228 IPR004827 GO:0003700|GO:0006355
Lan7g1003 325 MobiDBLite consensus disorder prediction 286 325 - -
Lan7g1003 325 CDD bZIP_plant_RF2 169 218 IPR044759 GO:0003700|GO:0006355
Lan7g1003 325 MobiDBLite consensus disorder prediction 292 310 - -
Lan7g1003 325 MobiDBLite consensus disorder prediction 311 325 - -
Lan7g1003 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 166 229 IPR004827 GO:0003700|GO:0006355
Lan7g1003 325 Coils Coil 191 267 - -
Lan7g1003 325 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 9 322 - -
Lan7g1003 325 MobiDBLite consensus disorder prediction 78 102 - -
Lan7g1003 325 SUPERFAMILY Leucine zipper domain 168 220 IPR046347 GO:0003700|GO:0006355
Lan7g1003 325 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1003 Lan-Chr7 10113923 10118584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1003 14 302 bZIP Transcription Factor Family AT1G43700 46.296 1.30e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan7g1003 bZIP_1 5.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1003 K20557 - gmx:778142 377.481