Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1001 ATGGAGAGAGTGTTGGATGTCGTTGAAGGCGTCGGAGAGAGCTCGCCGCCGCCGCGAAGCTTCACCGGTGTTAGCAACTACGACATGAGCATTGATGTGTACAATCGTTTACTTGAAATCGGTCACGATCAAGCGATTTCGAATCCCGATTTTAAGGAACAGTTGGAGGCTCACTTCAATCGCTTGCCTCCAAGGCAGGTGCATCATAAAAATGTTGTTGGTTTCATTGGGGCATGTACAAAGTCTCCACATCTGTGCATAGTAACTGAGTATATGACTGGAGGAAGTCTGTATGATTACTTGCACAAAAATCAAAATGTCTTGGAGCTGTCTCAGTTACTAAAGTTTGTGATTGATGTTTGCAAGGGGTCTGCGTCCAGAACTCCAAAGCATGGGCATCCTGAACTATTAGATTTGATGCAAAGATGTTGGGAAGGAGTTCCAAACAACTGGCCATCCTTCCATGAGATAACTGTTGAACTTGAGAATCTTCTGCAAGAAGTTGAGAGCGGTCTAGATTCACAAGCTAATGGCGCTTGA 540 0.45 MERVLDVVEGVGESSPPPRSFTGVSNYDMSIDVYNRLLEIGHDQAISNPDFKEQLEAHFNRLPPRQVHHKNVVGFIGACTKSPHLCIVTEYMTGGSLYDYLHKNQNVLELSQLLKFVIDVCKGSASRTPKHGHPELLDLMQRCWEGVPNNWPSFHEITVELENLLQEVESGLDSQANGA* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1001 179 SUPERFAMILY Protein kinase-like (PK-like) 59 123 IPR011009 -
Lan7g1001 179 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 65 123 - -
Lan7g1001 179 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 14 53 - -
Lan7g1001 179 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 129 172 - -
Lan7g1001 179 Pfam Protein tyrosine and serine/threonine kinase 65 123 IPR001245 GO:0004672|GO:0006468
Lan7g1001 179 Gene3D Transferase(Phosphotransferase) domain 1 90 177 - -
Lan7g1001 179 Gene3D Phosphorylase Kinase; domain 1 32 89 - -
Lan7g1001 179 SMART tyrkin_6 32 161 IPR020635 GO:0004713|GO:0006468
Lan7g1001 179 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 53 - -
Lan7g1001 179 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 65 123 - -
Lan7g1001 179 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 129 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1001 Lan-Chr7 10081736 10088626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1001 65 123 MAP Kinase Kinase Kinase AT4G38470 69.492 6.06e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan7g1001 PK_Tyr_Ser-Thr 2.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1001 - - lang:109352282 374.015