Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan7g0998 | ATGGCAGATCTTGTTAGCCACGGGAATGCTGACCGTGACATAGAGCAGGCATTGATTGCTTTGAAAAGGGGTGCTCAATTGCTTAAATATGGTCGTAAGGGAAAGCCCAAGTTTTGCCCATTTAAACTTTCCAGTGATGAGTCATCTTTAATCTGGATTTCTAGTAGTGGAGAAAGAAGTCTGAAGCTATCTTCTGTCTCAAAAATTATTCCTGGTCAAAGAACAGCTGTTTTCAAACGCTATCTGCGTCCCGAGAAGGACTATTTGTCTTTTTCACTTATTTATAATAACGGAAAGCAATCCCTTGATTTGATTTGCAAAGATAAAGCTGAGGCAGAAGCGTGGACTGCCGGTCTCAAAGCACTAATATCTTCTGGTCAAGGTGGTAGGTCCAAAATTGATGGATGGAGTGATGGAGCCCTCAATCTTGATGACAACAGAGACTTGAGTCCAAGCGAAAGTCCAGCCAGGGCATCACGAGATGCCAGTTCTCCCGACATTTCTGTGAGTCTTCCAAATACTTCACTAAAGTCCTTTAAGCCTGACACCACCATAAATTTAGAAAGGTCACATGCACCTTCAGACCCAACAAACATGCAAGTAAAAGGATCTGGTTCAGATGCTCTTCGTGTCAGTGTTTCAAGTGCCCCAAGCACATCCAGTCATGGATCTGCGCCAGATGATTATGATGCCCTGGGGGTTGTGTACATATGGGGGGAGGTTATCTGTGAAAATGTTGTGAAAGTTGGTGCTAATAAAAGTGTCAATTTTTCCAGCCCGAGGGCAGATGTTCTTCTCCCCAGACAATTGGAATCTGATGTAGTTTTAGATGTATATCATATAGCATGTGGTGTTAGACATGCCTCTCTAGTGACTAGACAAGGTGAAGTTTTTACATGGGGTGAAGAATCGGGAGGGCGCCTTGGCCATGGTTTTAGGAAGAATGTGGTTCAACCTCGTCTAGTTGAGGCATTGGCTTCTACATCTGTTGATTTTGTTGCATGTGGGGAGTTCCATTCCTGTGCTGTTACGACGGCTGGGGATCTATATACATGGGGTGATGGTACTCATAATGCTGGGCTTCTTGGTCATGGCACTGATATTAGTCATTGGATACCGAAGAGAATTGCAGGTCCATTAGAGGGACTTCAAGTTGCTTTTGTCAGTTGTGGTCCTTGGCACACAGCCTTGATAACTTCTAATGGGCAACTCTTTACATTTGGTGATGGAACATTTGGTGCCTTAGGCCATGGAGATAGGGAAAATGTTTCGTATCCTAGAGAAGTAGAATCCTTATTAGGATTAAGGACAATAGCTGCTGCATGTGGAGTGTGGCATACTGCGGCTGTTGTAGAGATTATTGTGACACAATCTAGTGCGAGTGTATCATCAGGTAAATTATTTACTTGGGGTGATGGAGACAAAGGCCGCCTCGGACATGGGGACAAGGAGGCACGGCTTAAACCAACTTGCGTGTCTGCGCTTATTGATTACAATTTTCATAAAGTTGCTAGTGGGCACAGTTTGACAGTTAGCCTGACAACATCTGGACGTGTTTTCACAATGGGAAGTACTGTTTATGGTCAGCTTGGGAATCCTCACTCTGATGGCAAGCTTCCCTGCTTGGTTGAAGATAAAATTGCTGGGGAATACATTGAAGAAATTGCATGTGGTGCATATCACGTTGGAGTTTTAACATCTAGAAATGAAGTTTATACATGGGGGAAGGGTGCGAACGGAAGATTGGGTCATGGAGATGTTGAAGATCGAAAAACACCAACTTTGGTTGAAGCGTTGAAGGATAAACATGTGAAATATATTGCATGTGTTTCAAACTACTCTGCTGCCATATGCCTTCATAAATGGGCATCAGGTACTGAGCAGTCTCAGTGCTCCGCTTGTAGACAGGCATTTGGCTTCACTAGAAAGAAGCACAATTGCTATAATTGTGGACTTGTGCACTGCCATCCATGTAGTTCAAGGAAAGCACTCAGAGCAGCCTTGGCTCCTAATCCTGGGAAGCCATATCGTGTTTGTGATTCTTGTTATGCAAAATTGAACAAGGTTGCTGAAGCTAGCAATAATAATCGGAGGAATGCTTTGCCTCGTCTTTCTGGTGAAAACAAGGACAGGTTAGACAAGTCCGAGGTAAGATTTTCGAAGTCAGTGGTTCCTTCTAATGTGGATTTGATAAAGCAACTAGATATTAAGGCGGCCAAACAAGGAAAGAAAGCTGATACATTCTCACTGGTTCGCACCTCACAAGCACCTTCTTTGCTACAGCTGAAAGATCTTGTCTTGTCTACTGCTATCGATATGAAACGAACAGTTCCAAGACCAGTTGTTGCACCATCTGGAATAAGTTCCAGGTCTGTGTCTCCTTTCTCTAGGGGAACAAGCCCCCCTCGTTCTGTTACGCCATTTCCAACAACATCGGGACTTTCCTTCTCCAAAAGTATTGCTGATAATTTGATAAAGACAAATGAACTTTTAAATCAAGAAGTGCAGACGTTACGTGCACAGGTCGAGAGACTGAAACAGAGATGTGAACAGCAAGAATTAGAGCTCCAAAGGTCATCAAAAAAGACTCAACAAGCTATGGCACTGGCTGCTGATGAATCTGCAAAATGTAATGCTGCAAAAGAAATTATGAAGCCACTTACATCACAGCTCAAAGATCTGGCTGAGAAGCTTCCTCCCGGAGTCTATGATGCAGAGAACATGAGACCTGCTTACCTACCAAATGGTTTTGAGTCAAATGGCATCCACTATCCGGACTCAAACGGAGAGCAACACTCCAGGGCTGAGTCAATTAGTAGCTCTAGTTCCGCCTCCATAGGAGTTGAATCCACTCTGTTGAATAGAACTGAGGGGAATTTGCCAGGAACCTATGGAACTAATTGGGGCCTTGATAATCAATCAGACAATTATCCAGATGTTAAATTGCCAAATGTCGGCGGTGTGCTTCAGGCAAGCAGCAGTAGCATGTCAGATACCGTTGATGGTAGGGATTCTGGGCATTTCCATGATAATGGCAGCAGTCTGAGATCGACAAATACTGCACAGGCTGGTAATAGTGATCAAGTTGAAGCAGAATGGATTGAACAATATGAACTTGGTGTTTATATAACACTTGTGGCCCTGCATGATGGAACAAGAGATCTGAAGCGAGTACGCTTTAGCCGGAGAAGATTTGGAGAGCACCAAGCAGAGTCTTGGTGGTCAGAGAACCGGGAGAAGGTATACGAAAAGTACAATGTTCATAGCACAGACAAGTCTTCTGGCCGGCTAAGCGATACTTAG | 3303 | 0.4393 | MADLVSHGNADRDIEQALIALKRGAQLLKYGRKGKPKFCPFKLSSDESSLIWISSSGERSLKLSSVSKIIPGQRTAVFKRYLRPEKDYLSFSLIYNNGKQSLDLICKDKAEAEAWTAGLKALISSGQGGRSKIDGWSDGALNLDDNRDLSPSESPARASRDASSPDISVSLPNTSLKSFKPDTTINLERSHAPSDPTNMQVKGSGSDALRVSVSSAPSTSSHGSAPDDYDALGVVYIWGEVICENVVKVGANKSVNFSSPRADVLLPRQLESDVVLDVYHIACGVRHASLVTRQGEVFTWGEESGGRLGHGFRKNVVQPRLVEALASTSVDFVACGEFHSCAVTTAGDLYTWGDGTHNAGLLGHGTDISHWIPKRIAGPLEGLQVAFVSCGPWHTALITSNGQLFTFGDGTFGALGHGDRENVSYPREVESLLGLRTIAAACGVWHTAAVVEIIVTQSSASVSSGKLFTWGDGDKGRLGHGDKEARLKPTCVSALIDYNFHKVASGHSLTVSLTTSGRVFTMGSTVYGQLGNPHSDGKLPCLVEDKIAGEYIEEIACGAYHVGVLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDKHVKYIACVSNYSAAICLHKWASGTEQSQCSACRQAFGFTRKKHNCYNCGLVHCHPCSSRKALRAALAPNPGKPYRVCDSCYAKLNKVAEASNNNRRNALPRLSGENKDRLDKSEVRFSKSVVPSNVDLIKQLDIKAAKQGKKADTFSLVRTSQAPSLLQLKDLVLSTAIDMKRTVPRPVVAPSGISSRSVSPFSRGTSPPRSVTPFPTTSGLSFSKSIADNLIKTNELLNQEVQTLRAQVERLKQRCEQQELELQRSSKKTQQAMALAADESAKCNAAKEIMKPLTSQLKDLAEKLPPGVYDAENMRPAYLPNGFESNGIHYPDSNGEQHSRAESISSSSSASIGVESTLLNRTEGNLPGTYGTNWGLDNQSDNYPDVKLPNVGGVLQASSSSMSDTVDGRDSGHFHDNGSSLRSTNTAQAGNSDQVEAEWIEQYELGVYITLVALHDGTRDLKRVRFSRRRFGEHQAESWWSENREKVYEKYNVHSTDKSSGRLSDT* | 1101 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan7g0998 | 1100 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 569 | 620 | IPR000408 | - | |
| Lan7g0998 | 1100 | MobiDBLite | consensus disorder prediction | 990 | 1024 | - | - | |
| Lan7g0998 | 1100 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN | 13 | 1088 | - | - | |
| Lan7g0998 | 1100 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 388 | 398 | IPR000408 | - | |
| Lan7g0998 | 1100 | ProSiteProfiles | Zinc finger FYVE/FYVE-related type profile. | 625 | 687 | IPR017455 | - | |
| Lan7g0998 | 1100 | Pfam | FYVE zinc finger | 621 | 687 | IPR000306 | GO:0046872 | |
| Lan7g0998 | 1100 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 465 | 516 | IPR000408 | - | |
| Lan7g0998 | 1100 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 13 | 1088 | - | - | |
| Lan7g0998 | 1100 | SUPERFAMILY | FYVE/PHD zinc finger | 621 | 695 | IPR011011 | - | |
| Lan7g0998 | 1100 | Gene3D | - | 459 | 626 | IPR009091 | - |
Showing 1 to 10 of 44 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan7g0998 | 7 | 9977418 | 9985312 | Lan8g0769 | 8 | 9842068 | 9848894 | PCT | |
| Lan7g0998 | 7 | 9977418 | 9985312 | Lan20g0080 | 20 | 432415 | 443648 | PCT | |
| Lan7g0998 | 7 | 9977418 | 9985312 | Lan4g1831 | 4 | 26862747 | 26887772 | PCT | |
| Lan8g0769 | 8 | 9842068 | 9848894 | Lan7g0998 | 7 | 9977418 | 9985312 | PCT | |
| Lan20g0080 | 20 | 432415 | 443648 | Lan7g0998 | 7 | 9977418 | 9985312 | PCT | |
| Lan4g1831 | 4 | 26862747 | 26887772 | Lan7g0998 | 7 | 9977418 | 9985312 | PCT |
Showing 1 to 6 of 6 entries