Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0983 ATGGCTCATGAGGATTGGGATCTCTTTGCAATAGTGAGAAGTTGCAAAGCTGCCACCTTTACTACCACTCCTACTACACAAACTCCACTCACTACCACCACCAATATTACTAGATACCCATCTCCAAAAGACACTACTACAACTACTTTTATTGCCAACCAAGAAAATGGTCCATTTAGTTTTCCTAATATTGTCCAATCACCTATAACCAATGGGTTACAAGAGCAGGTGCACCCATTGTTCATGACCTTTAACCCCACCACTAACACTAGTGGCAATAGCATCAATTCCAATTCCTTTATTTCTGATTTTTCAGGATCCATTGGACAAAAGCAACACCTCCTTACTACTGTTCTTGCTCCCACCACAAATTACACTCCAATTGGAGCACCCACTTCTGGTTTGGAAAGATTCCATCACCTACATCATCATCAACAACATGGACAGCAACATCAACATCCTGAAGAAGTTCAACAAGAACAAAAGCAGCACAATCAATTACATGTCCAAGTACCCCAAACCACTTCCATGGTTTTACCAAACATACAAACACCCAAATCAAGGAAAAGAAAAAGCCAACAAAAGAAAATAGTGTGCCATGTAACCGCTGATAACCTTTCATCAGATTTATGGGCATGGAGAAAATATGGACAAAAACCCATCAAGGGTTCTCCATATCCAAGGAACTATTATAGATGCAGTAGCTGCAAAGGATGTGCAGCGAGAAAGCAAGTAGAGCGAAGCACAACGGAACCCAACATGTTCATTCTCACATACACCGGAGAACACAAGCACCCCAAACCGGCTCACCGGAGCAAGTCATCCACGACCCATTTACCCGAAACACAAGAAAACGGGTCCCCCTCTAGTGTAGATGTTATTTCTCCCACAGAGCCAATTACAACATCTCTGTTGGTGAATATGAACAGCGAGGAACCAGAATCAGAATCTGGGTCCGACGATGAAGATGTTCTGATACCAAACTCGATGGGACATTCGGAGGCTGTGTTCTTGTGTTCGAATAGTGTGCCCGGGTTGGATGAACCGGAGCGGTTCATCTCTTCACGCTGTCCGGTTCTTCAAATTGGAAAAAACAATAATTGA 1104 0.4312 MAHEDWDLFAIVRSCKAATFTTTPTTQTPLTTTTNITRYPSPKDTTTTTFIANQENGPFSFPNIVQSPITNGLQEQVHPLFMTFNPTTNTSGNSINSNSFISDFSGSIGQKQHLLTTVLAPTTNYTPIGAPTSGLERFHHLHHHQQHGQQHQHPEEVQQEQKQHNQLHVQVPQTTSMVLPNIQTPKSRKRKSQQKKIVCHVTADNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCAARKQVERSTTEPNMFILTYTGEHKHPKPAHRSKSSTTHLPETQENGSPSSVDVISPTEPITTSLLVNMNSEEPESESGSDDEDVLIPNSMGHSEAVFLCSNSVPGLDEPERFISSRCPVLQIGKNNN* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0983 367 SUPERFAMILY WRKY DNA-binding domain 202 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan7g0983 367 MobiDBLite consensus disorder prediction 163 187 - -
Lan7g0983 367 SMART WRKY_cls 207 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan7g0983 367 MobiDBLite consensus disorder prediction 141 196 - -
Lan7g0983 367 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 4 328 - -
Lan7g0983 367 Pfam WRKY DNA -binding domain 209 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan7g0983 367 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 328 IPR044810 GO:0003700
Lan7g0983 367 MobiDBLite consensus disorder prediction 148 162 - -
Lan7g0983 367 MobiDBLite consensus disorder prediction 273 296 - -
Lan7g0983 367 Gene3D WRKY domain 190 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan7g0983 367 MobiDBLite consensus disorder prediction 261 296 - -
Lan7g0983 367 ProSiteProfiles WRKY domain profile. 202 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0983 Lan-Chr7 9629181 9630905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0983 186 271 WRKY Transcription Factor Family AT5G52830 80.233 1.90e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan7g0983 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0983 K13425 - aprc:113866622 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0983 7 9629181 9630905 Lan8g1119 8 14984099 14985764 LSH
Lan7g0983 7 9629181 9630905 Lan8g1119 8 14984099 14985764 PCT
Lan8g1119 8 14984099 14985764 Lan7g0983 7 9629181 9630905 PCT