Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0974 ATGGTATCAACAAACCCGGACCCGAAACCCGAGGGCTTCTACTTGGATCCCAATGGCATGACCCGAACGGGTCTCAACCCCTTCGCCTCCGTCACCACCGCTGCGTCACCGGTTGATTCCGCCGCGGTTTTGTCGGAGGACGCTGCTAAGAAAATCCGGAAGCCATACACTATCACTAAGTCAAGGGAGAATTGGACCGAACCAGAACATGACAAGTTCCTTGAAGCTCTTCAGCTGTTTGATCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGCAATACAGATACGTAGCCATGCACAGAAATATTTTTTAAAAGTTCAGAAGAGTGGGACGAATGAACATCTTCCCCCACCCAGACCTAAGAGAAAAGCTGCCCATCCGTATCCTCAGAAAGCTTCAAAAAATGGACCTTTTGAGTCTCCATCGGCTTTGCTTGAGCCTGGATATATCCGGAAGCATGACTCCCCGTCCCCAGCAATGCTTAAAACACCTATTACGAACACTGTGGTGCCTTCCAGGTCAAACACCACCTTGCAAGCAACTAATCTATCACATGTGCCCAAAGTGAATAATTCTTGCAGTAGCAGTGAGAGCACTCTTGGAGTGAGGCCGGTTGGTGAGTTTAATGGTCAAGGAAATAATAGCCATTCATTGAGAGTTCTTCCAGATTTTACTCATGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATGCAACTGAGCATTTGCAGAAGCTAAAAAAGATGGACCGTATAGATGTTGAGACGGTGCTACTGTTGATGAGAAACCTGTCTATCAATTTAACTAGCCCAGATTTTGAGGATCATAGAAAGCTGCTTTCATCATATGAGGTTGAATCGGAAACAGAAAGCTTTATGAATGCTGAAAGACCAGGGTCAGATGAGCAGTTGAAGAGTGTTATTTAG 939 0.4515 MVSTNPDPKPEGFYLDPNGMTRTGLNPFASVTTAASPVDSAAVLSEDAAKKIRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTAIQIRSHAQKYFLKVQKSGTNEHLPPPRPKRKAAHPYPQKASKNGPFESPSALLEPGYIRKHDSPSPAMLKTPITNTVVPSRSNTTLQATNLSHVPKVNNSCSSSESTLGVRPVGEFNGQGNNSHSLRVLPDFTHVYSFIGSVFDPNATEHLQKLKKMDRIDVETVLLLMRNLSINLTSPDFEDHRKLLSSYEVESETESFMNAERPGSDEQLKSVI* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0974 312 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Lan7g0974 312 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Lan7g0974 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Lan7g0974 312 Gene3D - 64 112 - -
Lan7g0974 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 60 109 IPR006447 GO:0003677
Lan7g0974 312 ProSiteProfiles SANT domain profile. 60 111 IPR017884 -
Lan7g0974 312 PANTHER SWI/SNF COMPLEX-RELATED 22 298 - -
Lan7g0974 312 MobiDBLite consensus disorder prediction 112 176 - -
Lan7g0974 312 CDD SANT 64 107 IPR001005 -
Lan7g0974 312 SUPERFAMILY Homeodomain-like 56 112 IPR009057 -
Lan7g0974 312 SMART sant 61 109 IPR001005 -
Lan7g0974 312 PANTHER PROTEIN REVEILLE 6 22 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0974 Lan-Chr7 9555178 9560726 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan7g0974 Myb_DNA-binding 1.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0974 - - gmx:778054 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0974 7 9555178 9560726 Lan8g1111 8 14705340 14712137 PCT
Lan8g1111 8 14705340 14712137 Lan7g0974 7 9555178 9560726 PCT