Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0968 ATGAAGTTCTGTAAAAAATACCAGGAGTACATGCTGCAAGAGCAGGAGAAGAAGCTTCCTGGGGTTGGCTTCAAGAACCATAAAATGATCTTGAAGAAGTGCAGAAGAAGAGACTGTCATTCCCACAAAGGCCATACTGAATCCCATGCAGTCAAACCCATCCATGATCATTGTTCAGTATGCGATGGAACCTTCTTCCCTTCCCTTCTAAATGAAATGACAGCAATAGTTGGCTGCTTTAATCAGCGCGCACAGACATTTTTGGAGCTACAACTCGCTTCTGGTTTCAAAAAATACTTATCTTGGTTCCTAGGAAAATTACTGGGGAACAACCATGCTGCTATGGTTCAAGAAGGCAAAGATATAATTACTTATGCACTCATAAATGCCATTGCAATTAGAAAAATACTAAAGAAGTATGATAAGATTCATTATTCCAAGCAAGGGCAATTGTTCAGGTCACAAGCGCAGAGTATGCATAAGGAAATTCTTCGAAGTCCCTGGCTTTATGAGCTTTTGGCTTTCCACATCAATTTAAGGGAAACCCGGGTCAATTCCATGAAGGAACCTGCTTTGTTCGAAGGATTTTCCCTCACATTTAAGGATGGAAAACCATCACTTACTTGTGAATTCTTTGATTCCATCAAAATCGATATAGACTTGACTTGTTCCATATGCTTGGATACAGTGTTTGATCCAGTTTCTTTGACTTGTGGCCATATATTATGTTATATTTGTGCTTGCTCAGCTGCATCAGTCTCTATTGTTAATGGACTTAAGACAGCAGATCATAGAAAGAAATGTCCTTTGTGCCGAGAGAGAGGAGTTTATGAAGGCTCTGTGCACTTAGAAGAACTAAATATTCTGTTATGCCGAAACTGTAAGGAATACTGGGAGCAAAGACTTCAGATAGAGAGGGTAGAGAGGGTTAAGCAAGCAAAAGAACATTGGGAGTTGCAGTGTAGGATGTTCATGGGTGTCTAA 984 0.4004 MKFCKKYQEYMLQEQEKKLPGVGFKNHKMILKKCRRRDCHSHKGHTESHAVKPIHDHCSVCDGTFFPSLLNEMTAIVGCFNQRAQTFLELQLASGFKKYLSWFLGKLLGNNHAAMVQEGKDIITYALINAIAIRKILKKYDKIHYSKQGQLFRSQAQSMHKEILRSPWLYELLAFHINLRETRVNSMKEPALFEGFSLTFKDGKPSLTCEFFDSIKIDIDLTCSICLDTVFDPVSLTCGHILCYICACSAASVSIVNGLKTADHRKKCPLCRERGVYEGSVHLEELNILLCRNCKEYWEQRLQIERVERVKQAKEHWELQCRMFMGV* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0968 327 ProSiteProfiles Zinc finger RING-type profile. 223 272 IPR001841 -
Lan7g0968 327 ProSitePatterns Zinc finger RING-type signature. 238 247 IPR017907 -
Lan7g0968 327 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 327 - -
Lan7g0968 327 SUPERFAMILY RING/U-box 216 275 - -
Lan7g0968 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 212 325 IPR013083 -
Lan7g0968 327 Pfam Zinc finger, C3HC4 type (RING finger) 220 273 - -
Lan7g0968 327 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 327 IPR033326 -
Lan7g0968 327 CDD SPX_BAH1-like 2 150 - -
Lan7g0968 327 SMART ring_2 223 271 IPR001841 -
Lan7g0968 327 ProSiteProfiles SPX domain profile. 1 154 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0968 Lan-Chr7 9510300 9513475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0968 220 272 C3H Transcription Factor Family AT4G28270 39.655 2.78e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0968 K16275 - gmx:100787904 516.924