Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0956 ATGCCAGTTGCAAAAGTCAAGGCCTCTGGCACTCTGGATGTCATGAAAACAGAAGACAAAATAGATAACATAATCAGACAAGAAGTTGGCATAGAACCCTACCTTTCCTTTCCAAGGGCTGACGACAGCCCTGTACAGTGGATTCAATTACTTCATGCTTTAGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTCTCTCCTTTTCCTGTCAAGGTTCAGTTGCTAAAGTGTGAAAAATGCTCTCGAGAGTTTTGCTCCCCTATTAACTATAGAAGACATATACGTGTACACCACCGGTTGAAGAAACTTGCTAAGGATTCTACAAAAAACAGGGATCTTTTAGGAGCATATTGGGATAAGCTCTCTGTGGAAGAGGCAAAGGCAGTTGTATCATTCAACAATGTGATGCTGGAGGAAGTTCCTGGATCTTCAATTTTAAGTGCTCTGACAGCTCTTGTTCAAAGGCAAGTGTTCTCTCCATTTCCACATTATTATCTGAGGGCTGGTGGTGCCCTTTTGGATATTGTTCAATCTAATCCATCCAGTTTTCCTATCTCTTCCCAAGAGTTGTTCAGTATTCTTGACGATGCAAGTGAAAAAACATGTTTATGTGGGACAGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAAATTGGTCTTCAGCCTAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTTGAGCAGAAATTGGTGAACGCATGGCTTGCCGACAAGGATGCTGAAGCATTGAGGTGTCAGAAGCAGCTGGTTGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAACACAGGGCAAAGGAACAAAGGCATGGGAATGAGGTAGAAATTAAAGAGGACACTGACAGCACAGCAGAGGCTTTAGCACCAGCAGAAGCATCTTTGGATACATATGATTTTGAAGCTCATAATCCTGATACATTTGTAGATAATATTCCTTCACATGTACCTTCCGAATGTCATGACACTAATGAAGGAATAGTAGGAGATCCTCAGCCAGGGTATGATTTAGGCACTGACCAGAATATTGAGCGACAGTCAGCCCATCATAATCATCAGTGCACAGCAGTTGCCAAACGGCAAGGCTCACCAAAACCACAACAGGCTGTAGGTGATGATTTGCAGGAAAGCCAAAATCCTCCAATTTCAAAGCCTGACGTCATTCTCAAATATGGAACCAATCATGATCAAAGGGCAGCTGCTATATTTAATGGTAGTGAAGTATGGCGTCGAAAGCCTAAACAAGAAGTGGACAGGGTGGTTTTGAAAGCTAAGGTGGATAAAGAACCAGACCAGGGTAAGAATCATGAAGTTTTGATAGGATCTGTATCTGTTACTCTTGGAAATTGCAGCCAATCAGAGGGCAATGCAGTGACATCTCGAGAGGATGGTGTGGTTAAGAATCTGGCCAAGCAGAATTGTTTTCAGGATAAGCCAATGAAACCTGATTTTGATCAGAGTGGCAACAATCAGCTAACGACAGTGTTTTGGAGGCCAGTTAGCAGGCATGAAATTAAAGATTCATTAGCAGTTAATAGAGGTGGGCCAGAAGCTGATGCAGTTTATGGAAATGATGATTGTCATAATTTGTCAGGTCTAAGTAGTTTAAGGTTGTGCAGTGTAGAAGGCAGAAGTGATATTGGTTCTGAGAACAATTCCCTCCATCTAGAGGGCACAGTGGAACTTGGAAAGTCACGTTTATCCAGCCATGCTGCAAGAGCTTTTCTTTCACAAAGATGGAAAGAAGCTATCTCCTCGGATCATGTGAAATTGGTTATTTACCCCAATTCTGAACCCCCTGGGTGCAAGAAGACACAAGACTCTGAAGTCACGACGGGCCAACATTCTGATGTGGACAAATCCAACATTCATGCAAGTGCACAGAACCAGTTGCCTGCTACCACAGGAGTTACTAAGATCAAGCCCAAAACAAAGCCTGAAAAGGGAACCAAGGCAAAGTATATTCCAAAACAAAAAACAACCACCTAA 2061 0.427 MPVAKVKASGTLDVMKTEDKIDNIIRQEVGIEPYLSFPRADDSPVQWIQLLHALDQQELPGWPLLSPFPVKVQLLKCEKCSREFCSPINYRRHIRVHHRLKKLAKDSTKNRDLLGAYWDKLSVEEAKAVVSFNNVMLEEVPGSSILSALTALVQRQVFSPFPHYYLRAGGALLDIVQSNPSSFPISSQELFSILDDASEKTCLCGTAVSMQRYIFDGEAGKIGLQPKNLVACTSFLLEQKLVNAWLADKDAEALRCQKQLVEEEEAAQKRQAEILERKRQKKLRQKEHRAKEQRHGNEVEIKEDTDSTAEALAPAEASLDTYDFEAHNPDTFVDNIPSHVPSECHDTNEGIVGDPQPGYDLGTDQNIERQSAHHNHQCTAVAKRQGSPKPQQAVGDDLQESQNPPISKPDVILKYGTNHDQRAAAIFNGSEVWRRKPKQEVDRVVLKAKVDKEPDQGKNHEVLIGSVSVTLGNCSQSEGNAVTSREDGVVKNLAKQNCFQDKPMKPDFDQSGNNQLTTVFWRPVSRHEIKDSLAVNRGGPEADAVYGNDDCHNLSGLSSLRLCSVEGRSDIGSENNSLHLEGTVELGKSRLSSHAARAFLSQRWKEAISSDHVKLVIYPNSEPPGCKKTQDSEVTTGQHSDVDKSNIHASAQNQLPATTGVTKIKPKTKPEKGTKAKYIPKQKTTT* 687
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0956 686 MobiDBLite consensus disorder prediction 290 309 - -
Lan7g0956 686 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Lan7g0956 686 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 685 - -
Lan7g0956 686 MobiDBLite consensus disorder prediction 621 686 - -
Lan7g0956 686 MobiDBLite consensus disorder prediction 370 409 - -
Lan7g0956 686 SMART c2h2final6 75 97 IPR013087 -
Lan7g0956 686 MobiDBLite consensus disorder prediction 625 661 - -
Lan7g0956 686 Coils Coil 251 285 - -
Lan7g0956 686 MobiDBLite consensus disorder prediction 370 406 - -
Lan7g0956 686 MobiDBLite consensus disorder prediction 278 310 - -
Lan7g0956 686 ProSitePatterns Zinc finger C2H2 type domain signature. 77 98 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan7g0956 Lan-Chr7 9319459 9327163 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0956 19 683 C2H2 Transcription Factor Family AT4G25610 40.762 6.64e-138 415
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan7g0956 None None None
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0956 7 9319459 9327163 Lan8g1097 8 14311906 14319276 LSH
Lan7g0956 7 9319459 9327163 Lan8g1097 8 14311906 14319276 PCT
Lan7g0956 7 9319459 9327163 Lan4g1858 4 27020412 27027108 PCT
Lan8g1097 8 14311906 14319276 Lan7g0956 7 9319459 9327163 PCT
Lan4g1858 4 27020412 27027108 Lan7g0956 7 9319459 9327163 PCT