Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan7g0956 | ATGCCAGTTGCAAAAGTCAAGGCCTCTGGCACTCTGGATGTCATGAAAACAGAAGACAAAATAGATAACATAATCAGACAAGAAGTTGGCATAGAACCCTACCTTTCCTTTCCAAGGGCTGACGACAGCCCTGTACAGTGGATTCAATTACTTCATGCTTTAGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTCTCTCCTTTTCCTGTCAAGGTTCAGTTGCTAAAGTGTGAAAAATGCTCTCGAGAGTTTTGCTCCCCTATTAACTATAGAAGACATATACGTGTACACCACCGGTTGAAGAAACTTGCTAAGGATTCTACAAAAAACAGGGATCTTTTAGGAGCATATTGGGATAAGCTCTCTGTGGAAGAGGCAAAGGCAGTTGTATCATTCAACAATGTGATGCTGGAGGAAGTTCCTGGATCTTCAATTTTAAGTGCTCTGACAGCTCTTGTTCAAAGGCAAGTGTTCTCTCCATTTCCACATTATTATCTGAGGGCTGGTGGTGCCCTTTTGGATATTGTTCAATCTAATCCATCCAGTTTTCCTATCTCTTCCCAAGAGTTGTTCAGTATTCTTGACGATGCAAGTGAAAAAACATGTTTATGTGGGACAGCAGTGTCAATGCAAAGATATATTTTTGATGGAGAGGCTGGAAAAATTGGTCTTCAGCCTAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTTGAGCAGAAATTGGTGAACGCATGGCTTGCCGACAAGGATGCTGAAGCATTGAGGTGTCAGAAGCAGCTGGTTGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAACACAGGGCAAAGGAACAAAGGCATGGGAATGAGGTAGAAATTAAAGAGGACACTGACAGCACAGCAGAGGCTTTAGCACCAGCAGAAGCATCTTTGGATACATATGATTTTGAAGCTCATAATCCTGATACATTTGTAGATAATATTCCTTCACATGTACCTTCCGAATGTCATGACACTAATGAAGGAATAGTAGGAGATCCTCAGCCAGGGTATGATTTAGGCACTGACCAGAATATTGAGCGACAGTCAGCCCATCATAATCATCAGTGCACAGCAGTTGCCAAACGGCAAGGCTCACCAAAACCACAACAGGCTGTAGGTGATGATTTGCAGGAAAGCCAAAATCCTCCAATTTCAAAGCCTGACGTCATTCTCAAATATGGAACCAATCATGATCAAAGGGCAGCTGCTATATTTAATGGTAGTGAAGTATGGCGTCGAAAGCCTAAACAAGAAGTGGACAGGGTGGTTTTGAAAGCTAAGGTGGATAAAGAACCAGACCAGGGTAAGAATCATGAAGTTTTGATAGGATCTGTATCTGTTACTCTTGGAAATTGCAGCCAATCAGAGGGCAATGCAGTGACATCTCGAGAGGATGGTGTGGTTAAGAATCTGGCCAAGCAGAATTGTTTTCAGGATAAGCCAATGAAACCTGATTTTGATCAGAGTGGCAACAATCAGCTAACGACAGTGTTTTGGAGGCCAGTTAGCAGGCATGAAATTAAAGATTCATTAGCAGTTAATAGAGGTGGGCCAGAAGCTGATGCAGTTTATGGAAATGATGATTGTCATAATTTGTCAGGTCTAAGTAGTTTAAGGTTGTGCAGTGTAGAAGGCAGAAGTGATATTGGTTCTGAGAACAATTCCCTCCATCTAGAGGGCACAGTGGAACTTGGAAAGTCACGTTTATCCAGCCATGCTGCAAGAGCTTTTCTTTCACAAAGATGGAAAGAAGCTATCTCCTCGGATCATGTGAAATTGGTTATTTACCCCAATTCTGAACCCCCTGGGTGCAAGAAGACACAAGACTCTGAAGTCACGACGGGCCAACATTCTGATGTGGACAAATCCAACATTCATGCAAGTGCACAGAACCAGTTGCCTGCTACCACAGGAGTTACTAAGATCAAGCCCAAAACAAAGCCTGAAAAGGGAACCAAGGCAAAGTATATTCCAAAACAAAAAACAACCACCTAA | 2061 | 0.427 | MPVAKVKASGTLDVMKTEDKIDNIIRQEVGIEPYLSFPRADDSPVQWIQLLHALDQQELPGWPLLSPFPVKVQLLKCEKCSREFCSPINYRRHIRVHHRLKKLAKDSTKNRDLLGAYWDKLSVEEAKAVVSFNNVMLEEVPGSSILSALTALVQRQVFSPFPHYYLRAGGALLDIVQSNPSSFPISSQELFSILDDASEKTCLCGTAVSMQRYIFDGEAGKIGLQPKNLVACTSFLLEQKLVNAWLADKDAEALRCQKQLVEEEEAAQKRQAEILERKRQKKLRQKEHRAKEQRHGNEVEIKEDTDSTAEALAPAEASLDTYDFEAHNPDTFVDNIPSHVPSECHDTNEGIVGDPQPGYDLGTDQNIERQSAHHNHQCTAVAKRQGSPKPQQAVGDDLQESQNPPISKPDVILKYGTNHDQRAAAIFNGSEVWRRKPKQEVDRVVLKAKVDKEPDQGKNHEVLIGSVSVTLGNCSQSEGNAVTSREDGVVKNLAKQNCFQDKPMKPDFDQSGNNQLTTVFWRPVSRHEIKDSLAVNRGGPEADAVYGNDDCHNLSGLSSLRLCSVEGRSDIGSENNSLHLEGTVELGKSRLSSHAARAFLSQRWKEAISSDHVKLVIYPNSEPPGCKKTQDSEVTTGQHSDVDKSNIHASAQNQLPATTGVTKIKPKTKPEKGTKAKYIPKQKTTT* | 687 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan7g0956 | 686 | MobiDBLite | consensus disorder prediction | 290 | 309 | - | - | |
Lan7g0956 | 686 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 75 | 102 | IPR013087 | - | |
Lan7g0956 | 686 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 1 | 685 | - | - | |
Lan7g0956 | 686 | MobiDBLite | consensus disorder prediction | 621 | 686 | - | - | |
Lan7g0956 | 686 | MobiDBLite | consensus disorder prediction | 370 | 409 | - | - | |
Lan7g0956 | 686 | SMART | c2h2final6 | 75 | 97 | IPR013087 | - | |
Lan7g0956 | 686 | MobiDBLite | consensus disorder prediction | 625 | 661 | - | - | |
Lan7g0956 | 686 | Coils | Coil | 251 | 285 | - | - | |
Lan7g0956 | 686 | MobiDBLite | consensus disorder prediction | 370 | 406 | - | - | |
Lan7g0956 | 686 | MobiDBLite | consensus disorder prediction | 278 | 310 | - | - | |
Lan7g0956 | 686 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 77 | 98 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan7g0956 | Lan-Chr7 | 9319459 | 9327163 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan7g0956 | 19 | 683 | C2H2 Transcription Factor Family | AT4G25610 | 40.762 | 6.64e-138 | 415 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Lan7g0956 | None | None | None |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan7g0956 | 7 | 9319459 | 9327163 | Lan8g1097 | 8 | 14311906 | 14319276 | LSH | |
Lan7g0956 | 7 | 9319459 | 9327163 | Lan8g1097 | 8 | 14311906 | 14319276 | PCT | |
Lan7g0956 | 7 | 9319459 | 9327163 | Lan4g1858 | 4 | 27020412 | 27027108 | PCT | |
Lan8g1097 | 8 | 14311906 | 14319276 | Lan7g0956 | 7 | 9319459 | 9327163 | PCT | |
Lan4g1858 | 4 | 27020412 | 27027108 | Lan7g0956 | 7 | 9319459 | 9327163 | PCT |