Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0948 ATGGCAACCCCTACAACACTCACCGCCCTCCTCCGCAGCGCCGCCGATAGATTCCCCTCCCGCCGAGCCATCTCACTCGTCGGAAAGTTCGACCTCACCCACTCCCGCCTCCATGAACTCGTCGACCTCGCCGCCGCTCGCCTTCTCTCCGCCGGAGTCAAGCCTGGCGACGTCATCGCCCTCACTTTCCCCAACACTGTCGAGTTTGTTATAATGTTTTTAGCTGTTATACGAGCTAGAGCTACGGCAGCACCACTTAACGCGGCTTACACGGCGGAAGAGTTCGAATTTTATTTATCTGATTCGGAATCGAAGCTACTAGTAACATCAGAAGAAGGAAATAAACCGGCTCAAGCCGCGGCTTCCAAACTCAGCATTCAACACGTAACAGCTTCCCTAACTGAATCGGAACTGAAACTGAACCTCTCACTGAACCAGACCGAGTCAGATCCTAATCCCAACTCGGTCTCCGAACTCACTAACGATCCATCCGACGTGGCACTCTTTCTCCACACTTCCGGAACCACAAGCCGTCCCAAGGGAGTACCTTTGACTCAGCACAATCTAGCTTCATCTGTTCGAAACATCGAATCGGTTTACCGACTCACCGAGTCTGACTCAACGGTTATCGTGCTCCCACTTTTCCACGTCCACGGGTTGATTGCCGGATTATTGAGTTCCCTCGGCGCCGGTGCGGCGGTGACGTTGCCTGCATCGGGGAGATTCTCCGCTTCAACGTTTTGGAAAGATATGGTCAATTACAACGCTACGTGGTACACAGCGGTTCCTACAATTCACCAAATAATACTGGACCGGCACCAGAGTAATCCCGAACCGGTTTACCCGAAACTCCGGTTTATTAGGAGCTGCAGCGCGTCGTTGGCACCGGCGATACTGCGTCGGTTGGAGGAGACGTTCGGGGCGCCGGTTTTGGAGGCTTATGCGATGACGGAGGCGTCGCATCTTATGTGTTCGAATCCGTTACCGGAGGATGGGGCCCACAAGGCCGGGTCGGTTGGGAAGCCCGTGGGCCAGGAGATGGTGACGTTGGATGAAACGGGTCGGGTTTTGGAGAAAGAAGTGAATGGGGAGGTTTGTATTAAGGGAGAGAACGTGACGAAAGGGTATAAGAATAATGCTGAGGCTAATACGACGGCGTTTCAGTTTGGATGGTTTCATACGGGTGATCTTGGATATTTTGATTCGGATGGGTATTTGCATCTCGTGGGTCGGATCAAGGAGCTTATAAACCGTGGAGGAGAAAAAATATCACCAATAGAAGTGGATGCTGTTCTTCTATCTCATCCAGATGTTGCTCAGGCAGTGGCATTTGGAGTGCCAGATGCCAAGTATGGCGAAGAGATAAACTGTGCAATCATTCCAAGAGAGGGATCAAACATTGATGAGGAAGAAGTGTTAAGATTTAGCAAGAAGAATCTTGCATCTTTCAAAGTCCCCAAAAAGGTTTACATCACTGATTCTTTTCCTAAGACCGCCACTGGTAAGATTTTAAGGCGCCTTGTGGCAGAACACTACGTCTCTCAAAATTGA 1551 0.5087 MATPTTLTALLRSAADRFPSRRAISLVGKFDLTHSRLHELVDLAAARLLSAGVKPGDVIALTFPNTVEFVIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSESKLLVTSEEGNKPAQAAASKLSIQHVTASLTESELKLNLSLNQTESDPNPNSVSELTNDPSDVALFLHTSGTTSRPKGVPLTQHNLASSVRNIESVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVTLPASGRFSASTFWKDMVNYNATWYTAVPTIHQIILDRHQSNPEPVYPKLRFIRSCSASLAPAILRRLEETFGAPVLEAYAMTEASHLMCSNPLPEDGAHKAGSVGKPVGQEMVTLDETGRVLEKEVNGEVCIKGENVTKGYKNNAEANTTAFQFGWFHTGDLGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDVAQAVAFGVPDAKYGEEINCAIIPREGSNIDEEEVLRFSKKNLASFKVPKKVYITDSFPKTATGKILRRLVAEHYVSQN* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0948 516 Gene3D - 412 514 IPR045851 -
Lan7g0948 516 Gene3D - 1 411 IPR042099 -
Lan7g0948 516 CDD FACL_fum10p_like 19 510 IPR045310 GO:0016874
Lan7g0948 516 Pfam AMP-binding enzyme 13 418 IPR000873 -
Lan7g0948 516 PANTHER ACYL-COA SYNTHETASE 1 515 - -
Lan7g0948 516 PANTHER OXALATE--COA LIGASE-LIKE 1 515 - -
Lan7g0948 516 ProSitePatterns Putative AMP-binding domain signature. 169 180 IPR020845 -
Lan7g0948 516 Pfam AMP-binding enzyme C-terminal domain 427 502 IPR025110 -
Lan7g0948 516 SUPERFAMILY Acetyl-CoA synthetase-like 4 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0948 Lan-Chr7 9144997 9149130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0948 5 515 Monolignol Biosynthesis Gene Families AT4G05160 29.278 1.65e-55 193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0948 7 9144997 9149130 Lan8g1092 8 14226081 14231352 LSH
Lan7g0948 7 9144997 9149130 Lan13g0741 13 7396448 7400307 LSH
Lan7g0948 7 9144997 9149130 Lan8g1092 8 14226081 14231352 PCT
Lan8g1092 8 14226081 14231352 Lan7g0948 7 9144997 9149130 PCT