Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0931 ATGGCTCCGCTACCACAGCCGATGGAACACAACGGCGACTCCGCTGCCTCAGCAGAATCTCAGAGATCTATTCCGACTCCGTTTCTCACCAAAACCTATCAACTCGTTGAGGACCAATCAATCGATGACGTTATTTCTTGGAATGAGGATGGATCCACCTTCATCGTTTGGAATCCTACCGTTTTCGCTAGAGATTTTTTACCTAAATATTTCAAGCACAACAATATCTCTAGCTTCGTTCGCCAACTCAACACTTATGGATTCAGAAAAGTTGTACCTGATCGTTGGGAATTCTCGAACGAGTATTTCCGTCGAGGCGAGAAACGGCTTCTGTGTGAAATTCAGCGACGGAAGATCTCGTCTCAGTGTCTGACGCCTCCACCATCATTGGCAGAAACCACGACGGTTGTGATTCCCTCACCGGTGCTGCTAAACGCGATACCTACAGCGATGCCGATTATATCACTGTCGAATTCAGGTGAGGAGCAGGTAATATTGTCGAACTCGTCGCAAACTCCAGCGGAGCTCATCGACGAGAACGAGAGGCTCAGAAAAGAGAATGTTCAACTCTCCAAGGAACTCACCGAGATGAGATCCCTCTACAACAATATTTTCTCTGTGGTGTCGAATTACGCCAACACCACCACCACCACCAACCACCACCAATCGGAGCAACGAAGCAGAGAGTCTGGTTTAACGGCGGCGAAACCGCTCGATTTGATGTCGATAAAGCGAACTTCCAAAGATGAAACCGCAACGGTTACTATGGAAAAAAATATGAATTTGAAGCTCTTTGGTGTAGCGCTTGGAGCAATGAAAGGTGGAAGTTGTGATTGA 837 0.4719 MAPLPQPMEHNGDSAASAESQRSIPTPFLTKTYQLVEDQSIDDVISWNEDGSTFIVWNPTVFARDFLPKYFKHNNISSFVRQLNTYGFRKVVPDRWEFSNEYFRRGEKRLLCEIQRRKISSQCLTPPPSLAETTTVVIPSPVLLNAIPTAMPIISLSNSGEEQVILSNSSQTPAELIDENERLRKENVQLSKELTEMRSLYNNIFSVVSNYANTTTTTNHHQSEQRSRESGLTAAKPLDLMSIKRTSKDETATVTMEKNMNLKLFGVALGAMKGGSCD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0931 278 Pfam HSF-type DNA-binding 28 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan7g0931 278 Gene3D - 20 118 IPR036388 -
Lan7g0931 278 Coils Coil 180 200 - -
Lan7g0931 278 PRINTS Heat shock factor (HSF) domain signature 28 51 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan7g0931 278 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan7g0931 278 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan7g0931 278 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 272 IPR027725 -
Lan7g0931 278 MobiDBLite consensus disorder prediction 1 22 - -
Lan7g0931 278 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-2A 10 272 - -
Lan7g0931 278 SMART hsfneu3 24 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan7g0931 278 SUPERFAMILY "Winged helix" DNA-binding domain 25 117 IPR036390 -
Lan7g0931 278 ProSitePatterns HSF-type DNA-binding domain signature. 67 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0931 Lan-Chr7 8946518 8947718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0931 16 270 HSF AT5G62020 51.103 1.01e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lan7g0931 HSF_DNA-bind 8.3e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0931 K09419 - gmx:100812267 356.681