LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan7g0927	ATGGCCTTTCTCCGCCGTCTCTTCCGCCGAAAGAAGCACTCACCGGGTGCTGATGCTGACGTGTCTAGACACAAAGACAAGAAGAAGAAAAACACCACCAAGAACAACAACAAGGACAACTCCAGCAACCCCTTTGACCCTTCCACTTCCTCCTTCGACGCTAACAGACATGCCATCGCCGTAGCCACTGCCACAGCAGCCGAGGCTGCTCTTGCAGCTGCGCATGCAGCTTCCGAGGTTGTTAGATTAACTAACGGAAGCGGTCCTCGAACCAGCAGGAGGCAAACATCGGCGGCCCATGTCCAACGGCGGTTGGTGGAGGAAACTGCCGCCGTGAAAATACAATCAGCATTCCGTGGTTACTTGGCAAGGAGGGCACTGAGAGCACTTAAAGCATTAGTGAAGTTGCAAGCATTGGTGAGGGGTCACATTATAAGAAAGCAAACTTCAGATATGCTTAGGCGCATGCAAACATTGGTGCGACTGCAGACCCGGGCACGTGCAAGTCGTGTGCACTTGTCAAATAATATACCTTCTTACAAGTCATCACATTCTCATTACCCTGTCCATGAAGAAAATTATGAACATTCACTTCGTGCCTATAGTATGAAATTGGATGGATCTATCCTCAAGAGATGTAGTTCAAATGCAAATTTTAGGGACACGGACTTGGAGAGAGCCCGGTTCGGTTCTAATTGGTTAGACAGTTGGATGGAAGAAAGTGAATGGAACCAAAGCAGAGATCCTCCATTGAAAAATATGCACCAAGATGATGAAAAGAGTGACAAGATTCTTGAAGTGGATACTTGGAAGCCACACATGAACTCTGACCATGGTAGCAGCAGCTCTTTTCAGCTAGCACATCATTACATAGCTTCTGATTACAATAATGAGAATATTATGGCTTATGACTCTCCATCGAAACGTTCTTCAGAGGCTCTAAATCCAAGCCTCTCATCTATAAAAGAAGTGCCATCACGAATTTCTGAGAATAGTCCACAATCATTTTCTGCCTCATCTAGGCTTGGAAGTGGTGCAAGGAGAGGTCCTTTTACACCAACTAAGAGTGAGTTTTCGTGGGGTTTCTTAAGTGGCTACTCGAGTCACCCGAATTACATGGCAAATACTGAATCTTCTAGAGCTAAGGTAAGGTCACAAAGTGCCCCAAGGCAAAGGCTAGAGCTTGAGAGATATGGTTCCAGTACAAGCTGTTTTGTTCAGGGACATTGGGATCACGCAGAGCCTAACTCAGATAGAGATTCTGATTTCAGGAGCAAGGCCAATTCAACTTCAAGCCACTTGAACAGAGTTGGGAGCACTAATTTAAGGTGA	1332	0.461	MAFLRRLFRRKKHSPGADADVSRHKDKKKKNTTKNNNKDNSSNPFDPSTSSFDANRHAIAVATATAAEAALAAAHAASEVVRLTNGSGPRTSRRQTSAAHVQRRLVEETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIIRKQTSDMLRRMQTLVRLQTRARASRVHLSNNIPSYKSSHSHYPVHEENYEHSLRAYSMKLDGSILKRCSSNANFRDTDLERARFGSNWLDSWMEESEWNQSRDPPLKNMHQDDEKSDKILEVDTWKPHMNSDHGSSSSFQLAHHYIASDYNNENIMAYDSPSKRSSEALNPSLSSIKEVPSRISENSPQSFSASSRLGSGARRGPFTPTKSEFSWGFLSGYSSHPNYMANTESSRAKVRSQSAPRQRLELERYGSSTSCFVQGHWDHAEPNSDRDSDFRSKANSTSSHLNRVGSTNLR*	444

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan7g0927	443	MobiDBLite	consensus disorder prediction	306	342	-	-
Lan7g0927	443	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	102	152	IPR027417	-
Lan7g0927	443	ProSiteProfiles	IQ motif profile.	131	158	IPR000048	GO:0005515
Lan7g0927	443	Pfam	IQ calmodulin-binding motif	131	148	IPR000048	GO:0005515
Lan7g0927	443	Pfam	IQ calmodulin-binding motif	110	128	IPR000048	GO:0005515
Lan7g0927	443	ProSiteProfiles	IQ motif profile.	107	135	IPR000048	GO:0005515
Lan7g0927	443	MobiDBLite	consensus disorder prediction	36	50	-	-
Lan7g0927	443	MobiDBLite	consensus disorder prediction	408	443	-	-
Lan7g0927	443	MobiDBLite	consensus disorder prediction	1	50	-	-
Lan7g0927	443	Gene3D	-	105	158	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan7g0927	Lan-Chr7	8822559	8827795	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan7g0927	1	410	IQD Protein Family	AT5G62070	44.626	2.22e-60	200

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan7g0927	-		-	pvu:PHAVU_004G120200g	511.146

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Lan7g0927	7	8822559	8827795	Lan13g0775	13	7983708	7990016	LSH
Lan7g0927	7	8822559	8827795	Lan8g0806	8	10018978	10023231	PCT
Lan8g0806	8	10018978	10023231	Lan7g0927	7	8822559	8827795	PCT

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