Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0927 ATGGCCTTTCTCCGCCGTCTCTTCCGCCGAAAGAAGCACTCACCGGGTGCTGATGCTGACGTGTCTAGACACAAAGACAAGAAGAAGAAAAACACCACCAAGAACAACAACAAGGACAACTCCAGCAACCCCTTTGACCCTTCCACTTCCTCCTTCGACGCTAACAGACATGCCATCGCCGTAGCCACTGCCACAGCAGCCGAGGCTGCTCTTGCAGCTGCGCATGCAGCTTCCGAGGTTGTTAGATTAACTAACGGAAGCGGTCCTCGAACCAGCAGGAGGCAAACATCGGCGGCCCATGTCCAACGGCGGTTGGTGGAGGAAACTGCCGCCGTGAAAATACAATCAGCATTCCGTGGTTACTTGGCAAGGAGGGCACTGAGAGCACTTAAAGCATTAGTGAAGTTGCAAGCATTGGTGAGGGGTCACATTATAAGAAAGCAAACTTCAGATATGCTTAGGCGCATGCAAACATTGGTGCGACTGCAGACCCGGGCACGTGCAAGTCGTGTGCACTTGTCAAATAATATACCTTCTTACAAGTCATCACATTCTCATTACCCTGTCCATGAAGAAAATTATGAACATTCACTTCGTGCCTATAGTATGAAATTGGATGGATCTATCCTCAAGAGATGTAGTTCAAATGCAAATTTTAGGGACACGGACTTGGAGAGAGCCCGGTTCGGTTCTAATTGGTTAGACAGTTGGATGGAAGAAAGTGAATGGAACCAAAGCAGAGATCCTCCATTGAAAAATATGCACCAAGATGATGAAAAGAGTGACAAGATTCTTGAAGTGGATACTTGGAAGCCACACATGAACTCTGACCATGGTAGCAGCAGCTCTTTTCAGCTAGCACATCATTACATAGCTTCTGATTACAATAATGAGAATATTATGGCTTATGACTCTCCATCGAAACGTTCTTCAGAGGCTCTAAATCCAAGCCTCTCATCTATAAAAGAAGTGCCATCACGAATTTCTGAGAATAGTCCACAATCATTTTCTGCCTCATCTAGGCTTGGAAGTGGTGCAAGGAGAGGTCCTTTTACACCAACTAAGAGTGAGTTTTCGTGGGGTTTCTTAAGTGGCTACTCGAGTCACCCGAATTACATGGCAAATACTGAATCTTCTAGAGCTAAGGTAAGGTCACAAAGTGCCCCAAGGCAAAGGCTAGAGCTTGAGAGATATGGTTCCAGTACAAGCTGTTTTGTTCAGGGACATTGGGATCACGCAGAGCCTAACTCAGATAGAGATTCTGATTTCAGGAGCAAGGCCAATTCAACTTCAAGCCACTTGAACAGAGTTGGGAGCACTAATTTAAGGTGA 1332 0.461 MAFLRRLFRRKKHSPGADADVSRHKDKKKKNTTKNNNKDNSSNPFDPSTSSFDANRHAIAVATATAAEAALAAAHAASEVVRLTNGSGPRTSRRQTSAAHVQRRLVEETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIIRKQTSDMLRRMQTLVRLQTRARASRVHLSNNIPSYKSSHSHYPVHEENYEHSLRAYSMKLDGSILKRCSSNANFRDTDLERARFGSNWLDSWMEESEWNQSRDPPLKNMHQDDEKSDKILEVDTWKPHMNSDHGSSSSFQLAHHYIASDYNNENIMAYDSPSKRSSEALNPSLSSIKEVPSRISENSPQSFSASSRLGSGARRGPFTPTKSEFSWGFLSGYSSHPNYMANTESSRAKVRSQSAPRQRLELERYGSSTSCFVQGHWDHAEPNSDRDSDFRSKANSTSSHLNRVGSTNLR* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0927 443 MobiDBLite consensus disorder prediction 306 342 - -
Lan7g0927 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 152 IPR027417 -
Lan7g0927 443 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Lan7g0927 443 Pfam IQ calmodulin-binding motif 131 148 IPR000048 GO:0005515
Lan7g0927 443 Pfam IQ calmodulin-binding motif 110 128 IPR000048 GO:0005515
Lan7g0927 443 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Lan7g0927 443 MobiDBLite consensus disorder prediction 36 50 - -
Lan7g0927 443 MobiDBLite consensus disorder prediction 408 443 - -
Lan7g0927 443 MobiDBLite consensus disorder prediction 1 50 - -
Lan7g0927 443 Gene3D - 105 158 - -
Lan7g0927 443 PANTHER CALMODULIN-BINDING PROTEIN 1 441 - -
Lan7g0927 443 SMART iq_5 106 128 IPR000048 GO:0005515
Lan7g0927 443 SMART iq_5 129 150 IPR000048 GO:0005515
Lan7g0927 443 MobiDBLite consensus disorder prediction 427 443 - -
Lan7g0927 443 MobiDBLite consensus disorder prediction 306 350 - -
Lan7g0927 443 Pfam Protein of unknown function (DUF4005) 332 397 IPR025064 -
Lan7g0927 443 MobiDBLite consensus disorder prediction 412 426 - -
Lan7g0927 443 PANTHER IQ-DOMAIN 5-RELATED 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0927 Lan-Chr7 8822559 8827795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0927 1 410 IQD Protein Family AT5G62070 44.626 2.22e-60 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0927 - - pvu:PHAVU_004G120200g 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0927 7 8822559 8827795 Lan13g0775 13 7983708 7990016 LSH
Lan7g0927 7 8822559 8827795 Lan8g0806 8 10018978 10023231 PCT
Lan8g0806 8 10018978 10023231 Lan7g0927 7 8822559 8827795 PCT