Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0913 ATGGCCTCTGCAGCCACAACACTATGTCTCCCTCCTCTTCCTTATACTCTCAGAACTCTGAAACCAACACTCTCTCCCTTTCTCTCTTCCCAACAATCACTCTCTTTCTCTCACTCCACGCTCCTTACTACAACAACTAAACTCTCCACAGCCACCCCACGCGCCTACGTCACTGGACCCGTATCGGACCCCATTTTCGGAGACCCAGATCCGAATATTGATGGGTCGGGTCCTGAGAAGGTCAAGCCACGTGGCGTTATAAGCCGAGAGCTTCTTTGGACGCTTCTGATGAAGCATAAGTTGAGGCTGGTTGTTTTGGTTGCAACTCTTTTAGCATGCACTACCTGCACTCTATCTATGCCCATTTTCTCTGGGAGGTTTTTTGAAGTTCTTATTGGTTCTAGACCAGAGCCATTATGGAAACTGCTCACTAAAATGGGAGTTCTGTATGCACTGGAGCCAATTTTAACTGTTATTTTTGTCATAAACATGAACATAGTGTGGGAGAAAGTTATGTCAACTCTAAGAGCTCAGATCTTTGGAAGAATTTTGATTCAGAAGGTTGAATTTTTTGACAAATACAAGGTTGGTGAACTGACTGGTTTGTTAACATCTGATTTGGGTTCTCTTAAAGGTATTGTGAGTGAGAATGTTTCAAGAGATCGCGGATTCAGGGCATTTACTGAGGTCTTTGGGACAATTTTCATACTTTTTGCTTTATCCCCTCAACTGGCACCAATTTTGGGTGTTCTGATGCTTGCAGTTTCTGTTTCAATTGCTGTCTACAAGAGATCAACTTTGCCGGTCTTTAAAGAACATGGTTTGGCTCAAGCATCTATATCTGATTGTGTATCAGAAACATTTTCTGCTATTCGAACAGTAAGATCCTTTGGTGGTGAAAAGCGCCAAATGTTTTCATTTGCTAATCAGGTTCTATCATTCCAATCAAGTGGGATAAAGCTTGGAATCTTCAAATCTGTGAATGAATCCTTGACGAGAGTTGCTATTTACATTTCTTTAATCGCATTATATTGTCTTGGTGGAAGCAAAGTTAAGGCGGGTGAGCTCTCTGTTGGACATATGGCATCTTTTGTTGGATACACTTTCACTTTAACATTTGCTGTTCAAGGACTGGTTAATACTTTTGGAGATCTTCGTGGTGCTCTTGCTGCTGTCGAAAGGATCAACTCTGTTTTGTCCGGGGTTCAAATCGATGATGCCCTTGCCAGTGGCTTAGAAAGAGAACTGAAACAAAAATCAGGGGGTGATGACAACTATAAATTGTTTTTCTCTACTAATTCTGATGAGAAAAACCAAAGTAATTATTTACAGTACATGTCAGCACTGAAAACATCCAGTAATTTGGTTAGCTTAACTTGGTCTGGAGATGTTTGCCTTGAAGATGTGTATTTCTCTTATCCTTTAAGGCCGAATGTGGAAATCTTACGAGGTTTAAATTTAAGACTAAAATGTGGAACTGTAACTGCATTGGTGGGTCCTAGTGGTGCAGGCAAAAGTACAATAGTACAGCTGTTGGCTCGCTATTATGAGCCAACAACAGGTTGTATAACAGTGGGAGGAGAGGATGTTCGAACATTTGACAAGAGTGAATGGGCCCGGGTTGTCTCTATTGTAAACCAAGAGCCTGTTCTCTTTTCGGTGTCTGTCGGAGAAAATATTGCATATGGGCTCCCAGATGATGATGTTTCTAAAGATGACATTATTAAGGCAGCGAAAGCTGCAAATGCTCATGACTTCATACTTTCACTTCCACAGGGCTATGATACATTGGTTGGTGAGCGTGGAGGCCTGTTGAGTGGAGGACAAAGACAGAGAATCGCCATTGCCCGAGCTCTGCTAAAAAACGCTCCAATCCTTATACTTGATGAGGCTACAAGTGCCTTAGATGCTACCAGTGAGCGCTTGGTTCAGGACGCTCTCAATCATTTGATGAAGGGGAGGACGACGTTAGTAATAGCTCACCGGTTAAGCACAGTTCAAAATGCCCACCAAATTGCACTGGTTTCTGATGGGGGGATTGCAGAGATAGGTACCCATCTTGAACTAGTGGCTAAGGAGGGCCAATACGCCTCACTGGTCAGCACTCAGAGGCTTGCATTTGAATGA 2127 0.4278 MASAATTLCLPPLPYTLRTLKPTLSPFLSSQQSLSFSHSTLLTTTTKLSTATPRAYVTGPVSDPIFGDPDPNIDGSGPEKVKPRGVISRELLWTLLMKHKLRLVVLVATLLACTTCTLSMPIFSGRFFEVLIGSRPEPLWKLLTKMGVLYALEPILTVIFVINMNIVWEKVMSTLRAQIFGRILIQKVEFFDKYKVGELTGLLTSDLGSLKGIVSENVSRDRGFRAFTEVFGTIFILFALSPQLAPILGVLMLAVSVSIAVYKRSTLPVFKEHGLAQASISDCVSETFSAIRTVRSFGGEKRQMFSFANQVLSFQSSGIKLGIFKSVNESLTRVAIYISLIALYCLGGSKVKAGELSVGHMASFVGYTFTLTFAVQGLVNTFGDLRGALAAVERINSVLSGVQIDDALASGLERELKQKSGGDDNYKLFFSTNSDEKNQSNYLQYMSALKTSSNLVSLTWSGDVCLEDVYFSYPLRPNVEILRGLNLRLKCGTVTALVGPSGAGKSTIVQLLARYYEPTTGCITVGGEDVRTFDKSEWARVVSIVNQEPVLFSVSVGENIAYGLPDDDVSKDDIIKAAKAANAHDFILSLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDATSERLVQDALNHLMKGRTTLVIAHRLSTVQNAHQIALVSDGGIAEIGTHLELVAKEGQYASLVSTQRLAFE* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0913 708 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 37 706 IPR039421 -
Lan7g0913 708 Pfam ABC transporter transmembrane region 106 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan7g0913 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 455 703 IPR027417 -
Lan7g0913 708 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 104 387 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan7g0913 708 Gene3D ABC transporter type 1, transmembrane domain 89 403 IPR036640 GO:0005524|GO:0016021
Lan7g0913 708 Pfam ABC transporter 482 633 IPR003439 GO:0005524
Lan7g0913 708 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 464 702 IPR003439 GO:0005524
Lan7g0913 708 SUPERFAMILY ABC transporter transmembrane region 92 395 IPR036640 GO:0005524|GO:0016021
Lan7g0913 708 SMART AAA_5 491 693 IPR003593 -
Lan7g0913 708 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 37 706 - -
Lan7g0913 708 CDD ABC_6TM_TAP_ABCB8_10_like 110 395 - -
Lan7g0913 708 Gene3D - 457 706 IPR027417 -
Lan7g0913 708 ProSitePatterns ABC transporters family signature. 605 619 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0913 Lan-Chr7 8497263 8505036 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0913 69 708 Calmodulin-binding Proteins AT2G36910 33.434 7.68e-80 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0913 K05657 - gmx:100791034 1060.83