Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0912 ATGGACTTAGACGGGGGCAACAAGCGCGTGTTCAACAGACTCGGTGGACCCGCGGGTGACCCGAGAAGCCAGAAAGTGTGCTATCATTGGCAAGCGGGTAAGTGCAATCGCCACCCGTGCGCGTTTCTTCATAGTGAGTTGCCTCCTCACAACTCCAATGGTGGCCCTTCCAAAAGGCCTTATGGGTCTGCGGAAAATTTAAGCTTTAACGGTCCACCACGCCGAACATCGAATTTCAACACATGGGGGCGTGGCGGTGGGGGAAGAGGTGGTGGTGGTGGTAGAGGTGGTGGCCGTGGCGGAGAAGTAAAGAAGGCTGATAAAATTTGTAATTATTGGGTTCAGGGGAATTGTAGTTTCGGAGAGAGGTGTAAGTTTCTTCATTCTTGGAGTTTAGGAGATGGTTTTTCTCTGTTGACCCAACTTGAAGGCCATAAGAACGTTGTGAGTGGAATAGCTTTTCCCTCAGGTTCTAATAAGCTTTATACGGGAAGTACTGATGAAACCGTAAGAGTTTGGGACTGCCAGTCTGGACAGTGTACGGCTGTGATCAATCTTGGTGGTGAAGTAGGTTGCATGATCAGTGAAGGTCCTTGGGTTTTTGTTGGCATACCCAATTTTGTCAAGGTCTGGAACACAGAAAATTTAATAGAGCTAAGTCTGAGCGGTCCCGTTGGACAAGTTTATGCTCTTGTTGTGATTAATGATATGCTCTTTGCTGGCACACAGGATGGATCTATACTAATTTGGAAGTTTAATTTAACTACCAACGGCTTTGAGCCAGCTGCATCACTTAAAGGTCATACCCATGGTGTTGTGTCATTAGTTGTTGGAGCTAATAGACTCTACTCTGGTTCAATGGACAACACAATAAGAGTCTGGAACCTTGAAACCCTGCAGTGTTTACAGACACTTACAGAGCACACTTCTGTGGTGATGTCTGTACTCTGCTGGGACCAGTTTCTGTTATCCTGTTCATTGGACAAGACAGTCAAGGTTTGGTTTGCCACAGAAAGTGGAAATCTGGAGGTCACATACACGCACAATGAAGAACATGGTATACTTACTCTCTGTGGGATGCATGATTCACAAGGCAAGCCCATTTTGGTGTGTTCTTGCAATGATAATACTGTGCACCTCTATGATCTGCCATCGTAA 1158 0.462 MDLDGGNKRVFNRLGGPAGDPRSQKVCYHWQAGKCNRHPCAFLHSELPPHNSNGGPSKRPYGSAENLSFNGPPRRTSNFNTWGRGGGGRGGGGGRGGGRGGEVKKADKICNYWVQGNCSFGERCKFLHSWSLGDGFSLLTQLEGHKNVVSGIAFPSGSNKLYTGSTDETVRVWDCQSGQCTAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTENLIELSLSGPVGQVYALVVINDMLFAGTQDGSILIWKFNLTTNGFEPAASLKGHTHGVVSLVVGANRLYSGSMDNTIRVWNLETLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHNEEHGILTLCGMHDSQGKPILVCSCNDNTVHLYDLPS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0912 385 ProSitePatterns Trp-Asp (WD) repeats signature. 282 296 IPR019775 -
Lan7g0912 385 ProSiteProfiles Trp-Asp (WD) repeats profile. 265 304 IPR001680 GO:0005515
Lan7g0912 385 SUPERFAMILY WD40 repeat-like 135 383 IPR036322 GO:0005515
Lan7g0912 385 MobiDBLite consensus disorder prediction 69 83 - -
Lan7g0912 385 ProSiteProfiles Zinc finger C3H1-type profile. 21 47 IPR000571 GO:0046872
Lan7g0912 385 PRINTS G protein beta WD-40 repeat signature 161 175 IPR020472 -
Lan7g0912 385 PRINTS G protein beta WD-40 repeat signature 282 296 IPR020472 -
Lan7g0912 385 PRINTS G protein beta WD-40 repeat signature 322 336 IPR020472 -
Lan7g0912 385 Gene3D - 101 130 - -
Lan7g0912 385 Pfam WD domain, G-beta repeat 138 174 IPR001680 GO:0005515
Lan7g0912 385 Pfam WD domain, G-beta repeat 262 295 IPR001680 GO:0005515
Lan7g0912 385 Pfam WD domain, G-beta repeat 300 334 IPR001680 GO:0005515
Lan7g0912 385 Pfam Zinc finger domain 110 128 - -
Lan7g0912 385 SMART c3hfinal6 106 130 IPR000571 GO:0046872
Lan7g0912 385 SMART c3hfinal6 22 46 IPR000571 GO:0046872
Lan7g0912 385 ProSiteProfiles Trp-Asp (WD) repeats profile. 142 183 IPR001680 GO:0005515
Lan7g0912 385 Gene3D - 221 385 IPR015943 GO:0005515
Lan7g0912 385 PANTHER - 1 385 IPR044715 -
Lan7g0912 385 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 265 298 - -
Lan7g0912 385 SUPERFAMILY CCCH zinc finger 103 129 IPR036855 GO:0046872
Lan7g0912 385 MobiDBLite consensus disorder prediction 1 22 - -
Lan7g0912 385 SMART WD40_4 214 251 IPR001680 GO:0005515
Lan7g0912 385 SMART WD40_4 258 295 IPR001680 GO:0005515
Lan7g0912 385 SMART WD40_4 339 382 IPR001680 GO:0005515
Lan7g0912 385 SMART WD40_4 298 335 IPR001680 GO:0005515
Lan7g0912 385 SMART WD40_4 135 174 IPR001680 GO:0005515
Lan7g0912 385 MobiDBLite consensus disorder prediction 51 100 - -
Lan7g0912 385 Gene3D - 131 196 IPR015943 GO:0005515
Lan7g0912 385 ProSiteProfiles Zinc finger C3H1-type profile. 104 131 IPR000571 GO:0046872
Lan7g0912 385 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 1 385 - -
Lan7g0912 385 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 142 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0912 Lan-Chr7 8488122 8492755 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0912 109 334 Acyl Lipid Metabolism Gene Families AT3G18860 27.049 3.96e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan7g0912 WD40 2e-05 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0912 - - lang:109352195 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0912 7 8488122 8492755 Lan13g0788 13 8369664 8375746 LSH