Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0910 ATGGACTTAGACGGGGGCAACAAGCGCGTGTTCAACAGACTCGGTGGACCCGCGGGTGACCCGAGAAGCCAGAAAGTGTGCTATCATTGGCAAGCGGGTAAGTGCAATCGCCACCCGTGCGCGTTTCTTCATAGTGAGTTGCCTCCTCACAACTCCAATGGTGGCCCTTCCAAAAGGCCTTATGGGTCTGCGGAAAATTTAAGCTTTAACGGTCCACCACGCCGAACATCGAATTTCAACACATGGGGGCGTGGCGGTGGGGGAAGAGGTGGTGGTGGTGGTAGAGGTGGTGGCCGTGGCGGAGAAGTAAAGAAGGCTGATAAAATTTGTAATTATTGGGTTCAGGGGAATTGTAGTTTCGGAGAGAGGTGTAAGTTTCTTCATTCTTGGAGTTTAGGAGATGGTTTTTCTCTGTTGACCCAACTTGAAGGCCATAAGAACGTTGTGAGTGGAATAGCTTTTCCCTCAGGTTCTAATAAGCTTTATACGGGAAGTACTGATGAAACCGTAAGAGTTTGGGACTGCCAGTCTGGACAGTGTACGGCTGTGATCAATCTTGGTGGTGAAGTAGGTTGCATGATCAGTGAAGGTCCTTGGGTTTTTGTTGGCATACCCAATTTTGTCAAGGTCTGGAACACAGAAAATTTAATAGAGCTAAGTCTGAGCGGTCCCGTTGGACAAGTTTATGCTCTTGTTGTGATTAATGATATGCTCTTTGCTGGCACACAGGATGGATCTATACTAATTTGGAAGTTTAATTTAACTACCAACGGCTTTGAGCCAGCTGCATCACTTAAAGGTCATACCCATGGTGTTGTGTCATTAGTTGTTGGAGCTAATAGACTCTACTCTGGTTCAATGGACAACACAATAAGAGTCTGGAACCTTGAAACCCTGCAGTGTTTACAGACACTTACAGAGCACACTTCTGTGGTGATGTCTGTACTCTGCTGGGACCAGTTTCTGTTATCCTGTTCATTGGACAAGACAGTCAAGGTTTGGTTTGCCACAGAAAGTGGAAATCTGGAGGTCACATACACGCACAATGAAGAACATGGTATACTTACTCTCTGTGGGATGCATGATTCACAAGGCAAGCCCATTTTGGTGTGTTCTTGCAATGATAATACTGTGCACCTCTATGATCTGCCATCATTTGCAGAGAGAGGCAAGATATTCACAAAACAGGAAGTAAGAGCAATTCAGATAGGGCCTGGTGGCATATTCTTCACTGGTGATGGAACTGGTCAAGTGAAAGTGTGGAATTGGATAGCTGAGCCAACTCCTTCCACCCAATAA 1299 0.4604 MDLDGGNKRVFNRLGGPAGDPRSQKVCYHWQAGKCNRHPCAFLHSELPPHNSNGGPSKRPYGSAENLSFNGPPRRTSNFNTWGRGGGGRGGGGGRGGGRGGEVKKADKICNYWVQGNCSFGERCKFLHSWSLGDGFSLLTQLEGHKNVVSGIAFPSGSNKLYTGSTDETVRVWDCQSGQCTAVINLGGEVGCMISEGPWVFVGIPNFVKVWNTENLIELSLSGPVGQVYALVVINDMLFAGTQDGSILIWKFNLTTNGFEPAASLKGHTHGVVSLVVGANRLYSGSMDNTIRVWNLETLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWFATESGNLEVTYTHNEEHGILTLCGMHDSQGKPILVCSCNDNTVHLYDLPSFAERGKIFTKQEVRAIQIGPGGIFFTGDGTGQVKVWNWIAEPTPSTQ* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0910 432 ProSitePatterns Trp-Asp (WD) repeats signature. 282 296 IPR019775 -
Lan7g0910 432 Pfam Zinc finger domain 110 128 - -
Lan7g0910 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 265 304 IPR001680 GO:0005515
Lan7g0910 432 Pfam WD domain, G-beta repeat 138 174 IPR001680 GO:0005515
Lan7g0910 432 Pfam WD domain, G-beta repeat 262 295 IPR001680 GO:0005515
Lan7g0910 432 Pfam WD domain, G-beta repeat 300 334 IPR001680 GO:0005515
Lan7g0910 432 SUPERFAMILY CCCH zinc finger 103 129 IPR036855 GO:0046872
Lan7g0910 432 PANTHER - 1 428 IPR044715 -
Lan7g0910 432 MobiDBLite consensus disorder prediction 69 83 - -
Lan7g0910 432 SMART WD40_4 135 174 IPR001680 GO:0005515
Lan7g0910 432 SMART WD40_4 214 251 IPR001680 GO:0005515
Lan7g0910 432 SMART WD40_4 339 382 IPR001680 GO:0005515
Lan7g0910 432 SMART WD40_4 258 295 IPR001680 GO:0005515
Lan7g0910 432 SMART WD40_4 298 335 IPR001680 GO:0005515
Lan7g0910 432 SMART WD40_4 385 422 IPR001680 GO:0005515
Lan7g0910 432 PRINTS G protein beta WD-40 repeat signature 161 175 IPR020472 -
Lan7g0910 432 PRINTS G protein beta WD-40 repeat signature 282 296 IPR020472 -
Lan7g0910 432 PRINTS G protein beta WD-40 repeat signature 322 336 IPR020472 -
Lan7g0910 432 Gene3D - 230 431 IPR015943 GO:0005515
Lan7g0910 432 ProSiteProfiles Zinc finger C3H1-type profile. 21 47 IPR000571 GO:0046872
Lan7g0910 432 SUPERFAMILY WD40 repeat-like 136 423 IPR036322 GO:0005515
Lan7g0910 432 Gene3D - 101 128 - -
Lan7g0910 432 Gene3D - 129 229 IPR015943 GO:0005515
Lan7g0910 432 SMART c3hfinal6 106 130 IPR000571 GO:0046872
Lan7g0910 432 SMART c3hfinal6 22 46 IPR000571 GO:0046872
Lan7g0910 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 142 183 IPR001680 GO:0005515
Lan7g0910 432 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 265 298 - -
Lan7g0910 432 MobiDBLite consensus disorder prediction 1 22 - -
Lan7g0910 432 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 1 428 - -
Lan7g0910 432 MobiDBLite consensus disorder prediction 51 100 - -
Lan7g0910 432 ProSiteProfiles Zinc finger C3H1-type profile. 104 131 IPR000571 GO:0046872
Lan7g0910 432 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 142 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0910 Lan-Chr7 8477238 8482523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0910 109 334 Acyl Lipid Metabolism Gene Families AT3G18860 27.049 4.54e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan7g0910 WD40 2.4e-05 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0910 - - lang:109352195 776.933