Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0899 ATGAAAACACTAACTATTCATACCGAAGATTCTTTTTCCAGCTTGCTGGAACTTGCTTCTAACAATGATACTGAAAGTTTTAAGGCACTTTTAGATAAGGATCCTTCTTCGATAAATGAAGTTGGGCTCTGGTACGCTCGTCAAAATGGATCCAAACAAATTGTTCTCGAGCATAGGACTCCTTTGATGGTTGCTGCTACCTATGGTAGCATCGAAGTTATGAAGATTATACTCTCGCGTCCAGAGGCAGATGTAAATTTGGCCTGTGCGATGAATGAAAGTACTGCTCTTCACTGTGCTGCTTCTGGTGGGTCTGTTAATGTAGTTGATGCTGTGAAGATTCTTTTATTGGCTGGTGCCAATCCAAATTGTGTGGATGCTAATGGAAATCGTCCTGTTGATGTTATTGTTGTTCATCCTAAGCTTCAAGGCGTGAAACCAGTTATTGAGGAACTTCTTTCGGGTAGTGCTTCTGATGTATCTGTTGGCGAGTTCTCTGTTCCAGCATGTGTTATTAATTCAAGTCCTGCTTCGCCTGTGCGTTTATCATCACCTGAAAACACAATGCTGTACTCTCCTTCAGGCTCACCATGTTCTCCTATGGCTTTGAAGTTTAATGATGCAGTTGTTGGATCTGTAGCAGAGAAGAAAGAATATCCAATTGACCCGTCTCTTCCAGATATCAAAAACAGCATATATGCTACGGATGAGTTTCGGATGTTTTCATTCAAGGTCCGGCCTTGTTCGCGGGCATACTCTCATGATTGGACTGAGTGTCCTTTTGTTCACCCTGGAGAGAATGCTCGTAGGAGAGACCCTAGAAAGTTCCATTACAGCTGTGTGCCATGCCCTGATTTTAGGAAAGGGGCTTGTAGACGCAATGATATGTGTGAGTATGCTCATGGAGTATTTGAGTGCTGGCTACACCCAGCACAGTATCGGACACGTCTCTGCAAAGATGGCACTAGTTGTGATAGAAGGGTGTGTTTTTTTGCTCACACCACAGAGGAACTTCGTCCCCTGTATGCGTCTATGGGATCTGCTGTCCCTTCACCTAGGTCATTTGCCTCTACTCCTAATGTCATGGACATGGCTGCTGCATTGAGCCTTTTCCCTGGTTCACCTTCCTCAGTCTCGTCCATGTCTCCATCGTGCTTTTCCCAGCCAATGTCTCCATCTGCAGATGGCATCTCACTCTCATCCGCTGCTTGGTCACAGCCTAATGTGCCAACTCTTCATTTACCTGGAAGCAATATTCAATGTAGTCGCCTGAGGTCTTCTCTTAGTGCTCGCGACATTCCACCCAAAGACTTGAATGTGTTGTCTGATTTTGATTGCCAGCAGCAAGTTTTGAATGACCTAGGCTGTTTCTCGCAGCTTCATCATGGTGGTGCTGTTTCAGTGAGTCGATCTGGTCGGTCTAAGACACTAACTCCGTCAAATCTTGAAGAGCTCTTTTCTTCTGAAATTTTATCTCCCCGATACTCTGACCCAGCTCTGGCTTCTGTTTTTAGTCCACACAAATCTGCTGTTCTCAATCAGTTTCAACAGCTTCAGACTATGTTAACACCAATAAATACCAATATGCTGTCTCCTAAGAATGTCGAGCATCCTTCATTACAGGCTCCATTTGGTATCTCTTCTCCTGGAAGGATGTCACCAAGATGTTTGGAACCCATTTCTCCAATGAACTCTCGTATATCTGCATTTGCTCAACGTGAGAAACAGCAGCACCAGCTGCTGAGCCTTAGTTCAAGAGACCTTGCAGCTAACAACCCTGCTTCAGCTGTCGGTTCCCCAGTAAGCACTTGGTCTAAGTGGGGATCTCCTAATGGAAAAGCAGATTGGTCAGTAAATGGAGAGGAACTAGGTCGTCGATCGAAAATAGCATCCTCATTTGAGCTTAAAAATAATGGGGAAGAGCCTGATCTATCCTTGGTCCAGTCTCTGGTGAAGGAATCTCCAGCTGAGATGATAAAAGAGAAGTTGACAGCTTGCTAA 2001 0.4468 MKTLTIHTEDSFSSLLELASNNDTESFKALLDKDPSSINEVGLWYARQNGSKQIVLEHRTPLMVAATYGSIEVMKIILSRPEADVNLACAMNESTALHCAASGGSVNVVDAVKILLLAGANPNCVDANGNRPVDVIVVHPKLQGVKPVIEELLSGSASDVSVGEFSVPACVINSSPASPVRLSSPENTMLYSPSGSPCSPMALKFNDAVVGSVAEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRNDMCEYAHGVFECWLHPAQYRTRLCKDGTSCDRRVCFFAHTTEELRPLYASMGSAVPSPRSFASTPNVMDMAAALSLFPGSPSSVSSMSPSCFSQPMSPSADGISLSSAAWSQPNVPTLHLPGSNIQCSRLRSSLSARDIPPKDLNVLSDFDCQQQVLNDLGCFSQLHHGGAVSVSRSGRSKTLTPSNLEELFSSEILSPRYSDPALASVFSPHKSAVLNQFQQLQTMLTPINTNMLSPKNVEHPSLQAPFGISSPGRMSPRCLEPISPMNSRISAFAQREKQQHQLLSLSSRDLAANNPASAVGSPVSTWSKWGSPNGKADWSVNGEELGRRSKIASSFELKNNGEEPDLSLVQSLVKESPAEMIKEKLTAC* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0899 666 SMART ANK_2a 92 124 IPR002110 GO:0005515
Lan7g0899 666 SMART ANK_2a 128 162 IPR002110 GO:0005515
Lan7g0899 666 SMART ANK_2a 10 40 IPR002110 GO:0005515
Lan7g0899 666 SMART ANK_2a 57 87 IPR002110 GO:0005515
Lan7g0899 666 PANTHER UNKEMPT FAMILY MEMBER 1 664 IPR045234 -
Lan7g0899 666 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 1 664 - -
Lan7g0899 666 SMART c3hfinal6 312 335 IPR000571 GO:0046872
Lan7g0899 666 SMART c3hfinal6 277 303 IPR000571 GO:0046872
Lan7g0899 666 Gene3D - 278 340 - -
Lan7g0899 666 ProSiteProfiles Ankyrin repeat profile. 92 127 IPR002110 GO:0005515
Lan7g0899 666 ProSiteProfiles Ankyrin repeat region circular profile. 92 126 - -
Lan7g0899 666 Gene3D - 4 168 IPR036770 -
Lan7g0899 666 Pfam Ankyrin repeats (3 copies) 19 125 IPR002110 GO:0005515
Lan7g0899 666 ProSiteProfiles Zinc finger C3H1-type profile. 282 304 IPR000571 GO:0046872
Lan7g0899 666 SUPERFAMILY Ankyrin repeat 8 140 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0899 Lan-Chr7 8224075 8227633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0899 9 654 C2H2 Transcription Factor Family AT5G12850 55.319 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan7g0899 Ank_2 3.3e-10 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0899 - - gmx:100791328 1019.22