Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0890 ATGACAGATCCTCGGTCCAACTTATTTGATGGATGGTTCAACTTCATGCCCCTTCATCCCTCTCACTGCTCTTATGATTCTCATGATCAATCTAGTTTCTTCTCCTCCTCCTCTTCCTATCCTCTTTCTTATTCATCAAATAACATGTTTGGAATTCAATCTGAAGCCTCATCATCTTCTAATATTGCATGTCCTTCTTCTCCTCCTCTCAGAGAGGCGCTTCCTCTAATAAACAAGTTAAGCCTCACAAATCCGCACCAAAACATTGAACCCTCAAATGGTACTTATATTGCTGTAGAAGAGGACAAAGAAGTTGAGAGTTTTTTCACTGGTACTGAATATGATGATGGTGATGGAAAAGCTGTGACTATGTCTCTTAACATAGGGCTTCCAAAAATGAATACTTCTTCTGATCTGAGGTCAAGGAAGGTCTCAAGTACTTCAATGGAAATAGCTGCAAAGGAGGGGGTGAATATGATTTCTGGACACCCTTTTGATGGATTGAACAAGGGCCATTATTGGATTCCCACCCCTTCTCAGATTCTCATTGGTCCTACACAGTTCTCATGTCATGTCTGCTCTAAAACTTTCAATAGATACAACAATCTTCAGATGCATATGTGGGGGCACGGATCTCAATACAGAAAGGGCCCTGATTCTCTAAAAGGAACACAACCAACAGCTATGTTAAGGCTTCCATGTTTTTGTTGTGCACCTGAATGCAAGCACAACATTGACCACCCAAGATCAAAGCCTCTCAAGGATTTCAGAACCCTTCAAACGCATTATAAGAGAAAGCATGGAATAAAACCCTATATGTGCCGAAAATGTAGCAAAGCATTTGCAGTAAAAGGTGATTGGAGGACACATGAGAAGAACTGTGGCAAAATATGGTATTGTTTATGTGGGTCTGATTTCAAACACAAAAGGTCTCTAAAAGACCACATCAAAGCATTTGGTTATGGCCATGGAGTTTTTGGCATGGATTCATTGCAAGAAGAAGATGAAGCAACATCTGAAATTGAACATTATGGGGAGAGCTCATTGTGA 1050 0.4048 MTDPRSNLFDGWFNFMPLHPSHCSYDSHDQSSFFSSSSSYPLSYSSNNMFGIQSEASSSSNIACPSSPPLREALPLINKLSLTNPHQNIEPSNGTYIAVEEDKEVESFFTGTEYDDGDGKAVTMSLNIGLPKMNTSSDLRSRKVSSTSMEIAAKEGVNMISGHPFDGLNKGHYWIPTPSQILIGPTQFSCHVCSKTFNRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCFCCAPECKHNIDHPRSKPLKDFRTLQTHYKRKHGIKPYMCRKCSKAFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGYGHGVFGMDSLQEEDEATSEIEHYGESSL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0890 349 Gene3D Classic Zinc Finger 249 321 - -
Lan7g0890 349 SUPERFAMILY beta-beta-alpha zinc fingers 181 210 IPR036236 -
Lan7g0890 349 Gene3D Classic Zinc Finger 187 210 - -
Lan7g0890 349 ProSiteProfiles Zinc finger C2H2 type domain profile. 188 215 IPR013087 -
Lan7g0890 349 SMART c2h2final6 188 210 IPR013087 -
Lan7g0890 349 SMART c2h2final6 272 292 IPR013087 -
Lan7g0890 349 PANTHER ZINC FINGER PROTEIN WIP2-LIKE 1 343 - -
Lan7g0890 349 ProSitePatterns Zinc finger C2H2 type domain signature. 190 210 IPR013087 -
Lan7g0890 349 PANTHER ZINC FINGER PROTEIN WIP2 1 343 IPR043584 GO:0003700|GO:0010468
Lan7g0890 349 SUPERFAMILY beta-beta-alpha zinc fingers 258 292 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0890 Lan-Chr7 8086755 8089536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0890 1 342 C2H2 Transcription Factor Family AT3G57670 50.263 1.17e-117 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan7g0890 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0890 - - gmx:100794446 507.679