Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0873 ATGTTGTTTTCTGATTTTCCGAGAAAACTAAGAAGCAAAAGAGAAAAGACATCATCATCATTGAATCATTTCAATGTTATGGAAAGAGAAAACGAAAGAGAATTTGATAGAAGTTACATAAAGAAAGGTCCATGGAGTGTTGAAGAAGATGAGGTGCTATTAAAGCATGTGAACAAGTATGGTCCAAGGGATTGGAGCTCCATTCGAACCAAAGCATTGTTGCATCGAACCGGAAAATCTTGTCGTCTTCGTTGGGTTAACAAGCTTAGACCAAATTTGAAGTCTGGCTGTAAGTTTTCAATAGAGGAGGAGAGGTTGGTGATAGAATTACAGGCAGAGTTTGGGAACAAATGGGCCAAAATTGCTACATTTTTGGAAGGGAGAACTGACAATGATGTCAAAAACTTCTGGAGCAGTAGGAGGAAAAGGTTGGAGAGGATGTTGAAGAAGCCATCACCACCAAAGCCTGAGAAAACCAAGGGAAAATCTCCTCTTAATCAAGTACAAGTAGAAGAGGTTGCTGCATGTAGTTCCAATCAGCTGGAGGAAAGCCCATGTTTCATGTACAATTCTTACCCTGCTTCCTATATTGATAAGACCAAGGAGATCAAAATGGTTCACCTACCAGATTTGACAAAACCAAACTACCAAAACCACTATTTGGATAGTGATCTCAATGCAATGGAGGTTAAGGCCACCCCATTTGATATGTTACCTGCACCATCCTTTGCATCTTCATCAGGGTACAACTTTCCTCAACTCCCGGAACCACAAATGGACTATTCATTATTCCCAGGGTGCCATGACCTTGCTCCGGAGCCTTTCGATCCCAACTTTATTGACATCTTTGAGCTGAAAAATTGCCCAGAAAGTGTATGCAGTCAGAAGGTTGTGACCAGGTTGCCAAGTCTTGGAATAGAGGGAAGTTGTCAAAATACAGTTCCAAGTGGCTTTTTTGAGGAATTCCCAACTGAGATGTTGGAATGCTTTGAGCATGTTCCAACCTCAGCAGAACAAAAAACTGTTTATTTTTAA 1035 0.4077 MLFSDFPRKLRSKREKTSSSLNHFNVMERENEREFDRSYIKKGPWSVEEDEVLLKHVNKYGPRDWSSIRTKALLHRTGKSCRLRWVNKLRPNLKSGCKFSIEEERLVIELQAEFGNKWAKIATFLEGRTDNDVKNFWSSRRKRLERMLKKPSPPKPEKTKGKSPLNQVQVEEVAACSSNQLEESPCFMYNSYPASYIDKTKEIKMVHLPDLTKPNYQNHYLDSDLNAMEVKATPFDMLPAPSFASSSGYNFPQLPEPQMDYSLFPGCHDLAPEPFDPNFIDIFELKNCPESVCSQKVVTRLPSLGIEGSCQNTVPSGFFEEFPTEMLECFEHVPTSAEQKTVYF* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0873 344 CDD SANT 44 89 IPR001005 -
Lan7g0873 344 Gene3D - 97 169 - -
Lan7g0873 344 CDD SANT 98 137 IPR001005 -
Lan7g0873 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 93 IPR017930 -
Lan7g0873 344 Pfam Myb-like DNA-binding domain 45 95 - -
Lan7g0873 344 SUPERFAMILY Homeodomain-like 40 137 IPR009057 -
Lan7g0873 344 PANTHER TRANSCRIPTION FACTOR DUO1 32 339 - -
Lan7g0873 344 MobiDBLite consensus disorder prediction 145 165 - -
Lan7g0873 344 SMART sant 41 91 IPR001005 -
Lan7g0873 344 SMART sant 95 143 IPR001005 -
Lan7g0873 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 145 IPR017930 -
Lan7g0873 344 ProSiteProfiles Myb-like domain profile. 98 141 IPR001005 -
Lan7g0873 344 Pfam Myb-like DNA-binding domain 98 138 IPR001005 -
Lan7g0873 344 Gene3D - 41 94 - -
Lan7g0873 344 PANTHER MYB TRANSCRIPTION FACTOR 32 339 - -
Lan7g0873 344 ProSiteProfiles Myb-like domain profile. 37 89 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0873 Lan-Chr7 7945665 7947622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0873 34 148 MYB Transcription Factor Family AT3G60460 78.261 7.58e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan7g0873 Myb_DNA-bind_6 3.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0873 K09422 - gmx:100793689 385.571