Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0852 ATGAAGGGTGGAAAATCCAAAACTGAAACAAAAAAAGCTGATCCCAAGCTTTCTGTGAATAAGAAGGGTTCTGGTGCAACCAAACCGACAAGGAAACCGGCTAAGGGAAAAGCCGCTAAAGACCCTAACAAGCCTAAGAGGCCTGCAAGTGCATTCTTCGTTTTCATGGAGGAGTTTAGGAAGCAATTCAGTAAAGAAAATCCTGACAACAAAGCTGTCTCTGCTGTTGGAAAGGCTGCTGGAGCCAAATGGAAGTCTTTGTCTGAAGCTGAGAAAGCACCATATGTGGCGAAGGCAGAGAAACGGAAGGTCGAGTATGAGAAGAATATGAGAGCCTATAACAACAAACAGGCTGCAGGTCCTGCTGCCGCGGAGGAGGAAGAAGAATCTGAGAAATCAATTTCAGAGGTGAATGATGAGGATGACGGAGATGATGATGATGAAAGTGACGAGGATGAGGATGATGATGATGATGATGCTGGTGCATTAAGATAA 495 0.4485 MKGGKSKTETKKADPKLSVNKKGSGATKPTRKPAKGKAAKDPNKPKRPASAFFVFMEEFRKQFSKENPDNKAVSAVGKAAGAKWKSLSEAEKAPYVAKAEKRKVEYEKNMRAYNNKQAAGPAAAEEEEESEKSISEVNDEDDGDDDDESDEDEDDDDDDAGALR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0852 164 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 154 IPR031061 -
Lan7g0852 164 SMART hmgende2 44 115 IPR009071 -
Lan7g0852 164 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Lan7g0852 164 Gene3D High mobility group box domain 29 142 IPR036910 -
Lan7g0852 164 Coils Coil 96 116 - -
Lan7g0852 164 MobiDBLite consensus disorder prediction 1 18 - -
Lan7g0852 164 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 1 154 - -
Lan7g0852 164 MobiDBLite consensus disorder prediction 129 164 - -
Lan7g0852 164 SUPERFAMILY HMG-box 36 116 IPR036910 -
Lan7g0852 164 MobiDBLite consensus disorder prediction 63 97 - -
Lan7g0852 164 CDD HMGB-UBF_HMG-box 45 111 - -
Lan7g0852 164 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Lan7g0852 164 MobiDBLite consensus disorder prediction 112 164 - -
Lan7g0852 164 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0852 Lan-Chr7 7759808 7779782 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Lan7g0852 HMG_box 2.9e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0852 K25507 - lang:109352139 247.284