Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0851 ATGAGTTGCTTTTATTGTCTTGCTTCACGTCAAAAGGATTTCAATGGAGTAGATGAAAGAGATAGAGAAAGCTTAGGGGCTTCAAGTTTCAGTTTCTATGAGCTTTCAATGGCAACAAAGGGTTTTAAGGAAGAAAATTTGATTGGAGAAGGAGGTTTTGGAAAAGTTTACAAGGGTCACCTCTCATCAGGCCAGGTTGTTGCTATAAAACAATTAAACCTTGATGGTCAACAAGGTTCTCATGAATTTGTTACTGAGGTTATTATGTTAAGCCTCTTCGACCATTCTAATCTTGTTAAGTTATTTGGTTATTGCACTGATGGAGATCAGAGACTTTTGGTTTATGAATACATGCCTATGGGTAGCCTTGAACATCACCTTTTTGATCCAGAGAGAAAAACACTAAGTTGGAATATTCGAATGAAGATAGCTGTTGGAGCTGCTAGAGGCGTTGAATATCTTCAATGCAGAGCATACCCACCAGTTATATACCGTGACTTGAAATCTGCCAACATATTATTGGACCATGATTTTAACCCAAAACTCTCAGATTTTGGACTTGCTAAACTTGGACCTATCGGAGACAAAACACATGTTTCAACAAGAGTGATGGGAACTTATGGTTATTGTGCACCTGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATATACAGCTTTGGTGTGGTCTTGTTAGAGTTGATCACTGGACATAAGGCTTTAGACTTGAGCAGAAAATCTGGCCACCAAAACTTAGTTGCATGGTTTCGTCCATATTTCAATGAGAGAAGAAAATATTCAAAAATGGTTGACCCACGTTTGCAAGGAAACTACCCTTTACGTAGTTTGCACCATGCAATTGCTATTACTGCAATGTGTCTCCAGGAGGATGCAAATCGTCGTCCACTTATTCGTGATATTGTTATTGCACTCGAATACATAGCTTCTAAGAGTAATTGTGATTTCAACACTTGTCAACAACAAGAACCAGAAACGGATATCAACTAA 1014 0.3817 MSCFYCLASRQKDFNGVDERDRESLGASSFSFYELSMATKGFKEENLIGEGGFGKVYKGHLSSGQVVAIKQLNLDGQQGSHEFVTEVIMLSLFDHSNLVKLFGYCTDGDQRLLVYEYMPMGSLEHHLFDPERKTLSWNIRMKIAVGAARGVEYLQCRAYPPVIYRDLKSANILLDHDFNPKLSDFGLAKLGPIGDKTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGHKALDLSRKSGHQNLVAWFRPYFNERRKYSKMVDPRLQGNYPLRSLHHAIAITAMCLQEDANRRPLIRDIVIALEYIASKSNCDFNTCQQQEPETDIN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0851 337 PANTHER OS07G0668900 PROTEIN 19 321 - -
Lan7g0851 337 PIRSF ILK 27 325 - -
Lan7g0851 337 Gene3D Transferase(Phosphotransferase) domain 1 118 335 - -
Lan7g0851 337 CDD STKc_IRAK 48 314 - -
Lan7g0851 337 ProSiteProfiles Protein kinase domain profile. 42 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0851 337 SUPERFAMILY Protein kinase-like (PK-like) 24 314 IPR011009 -
Lan7g0851 337 Pfam Protein kinase domain 42 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0851 337 SMART serkin_6 42 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0851 337 Gene3D Phosphorylase Kinase; domain 1 14 117 - -
Lan7g0851 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lan7g0851 337 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Lan7g0851 337 PANTHER OS07G0668900 PROTEIN 19 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0851 Lan-Chr7 7754753 7757204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0851 9 332 Glycoside Hydrolase AT3G07070 56.269 1.23e-135 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan7g0851 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0851 - - lang:109352138 689.493