Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0845 ATGGCGGATAAGGGCTCCAATGAAGTCTCCAGTTCTGGCAATATTTCAGCTGAGTCTTCCGATTCAACTCTTCAGCTCAATATCAAGACTCTAGATTCCCGCATATACAGTTTTCAAGCGGACAAAAATATGTCTGTTTCATCATTCAAAGAGAAAATTGTCAATGAAACTGGTGTTCCAGTTAGCCGGCAACGGCTGATATTTAGAGGAAGAGTATTAAAGGATGAGCACTCTCTTTCTGAGTATTATCTTGAAAATGGACACACCTTGCATTTAGTTGAAAGGCACCCAAATCAGTCACAGGTTTCCGGTACGAGTTCTGCTGAGCCAACTGTTACAAATGGTAACCAAGGAAATGATGCTGGCTCGGGGGTTCCTCGTTTTGGACAGATTTCACACAATGTTGTTCTCGGGCCATTTAATTTGGGGGAACAAGCTGGAGGCATGGTTCCTGACCTTAGTGGGGTTATTGGGGCAGTCTTGAATTCTATTGGTATTGGTGGCCAGAGCAGAAATAGTGTTTCTAATGCTACACAAACTTCAGCTCCACCAGGGAATGAAACTGAAGGAATACATGCTGGAAATCAAAACCTAGCAGGAAATCAAGCGCAGCTTGGACAGACATTTCGTGGTCAGACATTCCAATCTCTGCCTCAAATTGTTCAGACTCCTGTCCCTGCAGGGGCCACACCCATTCCTTCGCTTAATGCACCAATCCCTCATTCATTGACCACACTTTCTGAGTTTATAAATAACATGGAACATACACTGTCACAAACTGGTCATCGGCCAAATTTGTCTTCAACTAACCACAGAGATCAGCGCGTAGAATTGCCAACCAATGCACAAGGGTTGCCAACGCTTGAATCATTAAGTGCCATCTTGCGACGCACTGGACAATTGCTTAGTGATAACACTGTTGCCGCACTATGTCATATTGCAGGACACATAGAGCAGGAGGGAACTTCTTCTGATCTAAGTGTAAGAGGCCAAATCCAGTCAGAGACCATGCAAACTGGAATTGCCGTGCAGCATTTAGGTGCACTTCTTCTTGAGCTTGGCCGAACAATGTTGACACTGCGTATGGGGCAATCTTATGCTGAATCTTCTGTTAATGCTGGACCAGCAGTTTATATTTCTCCAGCAGGACCGAATCCTATAATGGTGCAGCCCTTTCCACTTCAGACAAGCTCTCTTATTGGTGGTCCTGTTCCTTCTTCAACTCCTCCAACACTTGGCACTGTTGGTGTTGGAAGAGTTCCTAGGAACGTACACCTTCATATACATGCTGGAACCTCTCGTGCACCGATTGTTTCATTAATTGGTTCTAGACCAAATAACAGGGAACGTAGAAGAGGTGAACACCATATTGAGCTCGGCTCTGGTGTTGGAGTTGCTAGCGGCACAGAAACTGGGTTTGCTGTTTCTACTTCACAGCCACCTTCTGGTGCAACTCCGTTGTCATCTGTTTTAGCTGGAATCAATTCTCGCCTTAGAAATTTTGTTGGTAACATGCAAGGAGATAACACAGTTCTCTCAGGTCAAATAGAATCAACTAGTCAGGATTTGTCTGCTGGTTCTGACTTGACACCTGCACTGGGAAATGAACAGCAAGATACCATGGAGATGAATGGCTCAAGGGCTGCTACTGTATCCTCAGTTGGTTGTATTTCTGAAAGTGGACTACAGAAGCCCCAAACAGAAGCAGCCCCAACCTGTAGTAGTGGCGAGAGAGATGTTTCAGTTGACAAATTTGTTTCTGATCAAGGCTGTTCAAGCAGAGAAACAGTAGCAAAATCAGAAAAAGTACAAGATGTAGCTGAACCTGCCAAAGCTGCTCCATTAGGATTGGGTATGGGTGGTCTGGAGCGTAAGAGGCAAACTCGACCTCAACTTGCTGTAAGTAAAGGTTCCGGTGATGGATCATCTGGTTCTTCTGCCAATCAAAGTCAGCAAACTAGAACAGATGGACAAAATTTATTGCAAACTCTTAACAGTCATGGATCTACTGTGAAATTGGGAAATCCTAATGGGCCATCCCAGCAGCCCCTGCCCACTGATGATAGCCAGATTGATATGGCTGGTTTAATGTCTCAGGTTTTGCGTAGTCCCGCTATGAATGGTTTGTTGTCAGGGGTTTCACAGCAAACTGGAGTTGACTCACCGGATGGCTTGAGGAATATGTTGCAACAGTTCACACAAAACCCACAAATGATGAACACAGTCAATCAAATTGCGGAACAGGTTGGCAGCCAAGATATTGGAAATATGTTTGCTGGAATGGGAAGTGGACAAGGTGGTGGTATTGACTTGTCAAGGATGTTCCAACAGATGATGCCAATTGTATCTCGAGCCCTTGGTGGGGGGACTCCTCCACTATTCTCTGCAATGGGACCGCAACCCCAGGCACCCTCCAGAGATGGAACACTTGACAGAGATGATAATCAAAGTTTACAGCTCAACCTTCAACCAGTGGTGGAGAGGATTGAGCGTGTGAGCCCACCTGCAGATGTTTTCCGTGCTGTAGCTGAAAATGCTGTCCATGCATCCGGCAATAGAAGTGATTCTAATGATCTCTTGGAGGAGTTATGCAGCAATGAGAGCCTTGCCAACGAATACGCCGAGATGTTACGAAATGATGTAAAACAACGATTCAAGGGACATTCTGAGATTGACAAGTGCTAA 2685 0.4521 MADKGSNEVSSSGNISAESSDSTLQLNIKTLDSRIYSFQADKNMSVSSFKEKIVNETGVPVSRQRLIFRGRVLKDEHSLSEYYLENGHTLHLVERHPNQSQVSGTSSAEPTVTNGNQGNDAGSGVPRFGQISHNVVLGPFNLGEQAGGMVPDLSGVIGAVLNSIGIGGQSRNSVSNATQTSAPPGNETEGIHAGNQNLAGNQAQLGQTFRGQTFQSLPQIVQTPVPAGATPIPSLNAPIPHSLTTLSEFINNMEHTLSQTGHRPNLSSTNHRDQRVELPTNAQGLPTLESLSAILRRTGQLLSDNTVAALCHIAGHIEQEGTSSDLSVRGQIQSETMQTGIAVQHLGALLLELGRTMLTLRMGQSYAESSVNAGPAVYISPAGPNPIMVQPFPLQTSSLIGGPVPSSTPPTLGTVGVGRVPRNVHLHIHAGTSRAPIVSLIGSRPNNRERRRGEHHIELGSGVGVASGTETGFAVSTSQPPSGATPLSSVLAGINSRLRNFVGNMQGDNTVLSGQIESTSQDLSAGSDLTPALGNEQQDTMEMNGSRAATVSSVGCISESGLQKPQTEAAPTCSSGERDVSVDKFVSDQGCSSRETVAKSEKVQDVAEPAKAAPLGLGMGGLERKRQTRPQLAVSKGSGDGSSGSSANQSQQTRTDGQNLLQTLNSHGSTVKLGNPNGPSQQPLPTDDSQIDMAGLMSQVLRSPAMNGLLSGVSQQTGVDSPDGLRNMLQQFTQNPQMMNTVNQIAEQVGSQDIGNMFAGMGSGQGGGIDLSRMFQQMMPIVSRALGGGTPPLFSAMGPQPQAPSRDGTLDRDDNQSLQLNLQPVVERIERVSPPADVFRAVAENAVHASGNRSDSNDLLEELCSNESLANEYAEMLRNDVKQRFKGHSEIDKC* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0845 894 Pfam Ubiquitin family 26 95 IPR000626 GO:0005515
Lan7g0845 894 CDD Ubl_ubiquitin_like 26 93 - -
Lan7g0845 894 MobiDBLite consensus disorder prediction 631 688 - -
Lan7g0845 894 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 890 - -
Lan7g0845 894 MobiDBLite consensus disorder prediction 97 127 - -
Lan7g0845 894 MobiDBLite consensus disorder prediction 169 194 - -
Lan7g0845 894 SMART ubq_7 24 95 IPR000626 GO:0005515
Lan7g0845 894 PANTHER OS07G0498800 PROTEIN 6 890 - -
Lan7g0845 894 MobiDBLite consensus disorder prediction 596 690 - -
Lan7g0845 894 Gene3D - 12 108 - -
Lan7g0845 894 MobiDBLite consensus disorder prediction 1 22 - -
Lan7g0845 894 PRINTS Ubiquitin signature 34 54 IPR019956 -
Lan7g0845 894 PRINTS Ubiquitin signature 55 75 IPR019956 -
Lan7g0845 894 PRINTS Ubiquitin signature 76 97 IPR019956 -
Lan7g0845 894 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Lan7g0845 894 SUPERFAMILY Ubiquitin-like 18 97 IPR029071 -
Lan7g0845 894 MobiDBLite consensus disorder prediction 97 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0845 Lan-Chr7 7691641 7702235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0845 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 34.722 4.63e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0845 - - lang:109325669 1283.09