Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0840 ATGACTTCGGCCACGGGGATTAACATGTTGACCTCCGTTCTTTTAGCAATTTTCCTCCCTTGTATTGGCATGAGCACCGTGTTCATAGTCTACATGTGCCTTCTCTGGTACACCGCAAGTCACCAACCCGCTCATTCTGGTCCACCGGCCAAGCCGGTCATTGAGAAGGGTCTTTCTACGTCGGAGCTGGATAAACTTCCGAGGATCACAGGCAAAGAACTTGTCATGGGGTCTGAATGCGCCGTGTGCCTCGACGAGATCGGAAACGAACAACCGGCTCGACTTGTTCCCGGTTGCAACCACGGGTTCCATATTGAATGCGACGACACGTGGCTGTCTAAGCACCCTGTGTGTCCCGTTTGTAGAACTAAACTGGACTCTGAGTTTTTCACTTCCTCTACAAATCAAAGTCCATGTTGA 420 0.5071 MTSATGINMLTSVLLAIFLPCIGMSTVFIVYMCLLWYTASHQPAHSGPPAKPVIEKGLSTSELDKLPRITGKELVMGSECAVCLDEIGNEQPARLVPGCNHGFHIECDDTWLSKHPVCPVCRTKLDSEFFTSSTNQSPC* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0840 139 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 9 139 - -
Lan7g0840 139 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 9 139 - -
Lan7g0840 139 Pfam Ring finger domain 79 122 IPR001841 -
Lan7g0840 139 SUPERFAMILY RING/U-box 65 127 - -
Lan7g0840 139 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 128 IPR013083 -
Lan7g0840 139 SMART ring_2 80 121 IPR001841 -
Lan7g0840 139 ProSiteProfiles Zinc finger RING-type profile. 80 122 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0840 Lan-Chr7 7647832 7648604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0840 3 139 C3H Transcription Factor Family AT5G42200 49.296 2.12e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0840 K19037 - gmx:100811160 210.305