Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0819 ATGGCAACTAGGCTTCAGTTTGAGAATTCTTGTGAAATTGGAGTATTTTCTAAACTTACCAATGCCTATTGTTTGGTAGCGATCGGAGGTTCTGAAAACTTCTACAGTGTATTTGAATCTGAGTTAGCTGGTGTTATCCCTGTGGTCAAAACATCCATTGGTGGTACTCGTATTATTGGTCGTCTTTGTGCTGGAAACAAGAATGGGCTTCTATTGCCCCATACCACCACAGATCAAGAACTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGAGAGTAGATGAAAGATTATCTGCTCTGGGAAATTGTATAGCATGTAACGACCATGTGGCCCTCACTCACACTGATCTTGACAGGGAAACTGAGGAGATGATTGCCGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACCATTGCCGGTAATATTCTTGTCGGTAGTTTCTGTGCCTTCTCCAATAGAGGTGGTTTGGTCCACCCCCATACTTCCATAGAAGACTTGGACGAACTTTCAACGCTTCTTCAAGTTCCATTGGTGGCTGGGACTGTGAACCGTGGTAGCGAAGTAATAGCCGCTGGAATGACAGTTAACGATTGGACAGCATTTTGTGGTTCAGACACCACAGCAACAGAGCTTTCTGTGATTGAGAGTGTTTTCAAGCTGAGGGAAGCACAGCCTAATGCTATTGTGGATGAGATGAGGAAATCACTCATTGATAGCTATGTCTGA 738 0.435 MATRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSVFESELAGVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRVDERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSFCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLIDSYV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0819 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Lan7g0819 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 - -
Lan7g0819 245 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Lan7g0819 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Lan7g0819 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Lan7g0819 245 Gene3D - 1 225 - -
Lan7g0819 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 IPR002769 GO:0042256|GO:0043022
Lan7g0819 245 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 224 IPR002769 GO:0042256|GO:0043022
Lan7g0819 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Lan7g0819 245 SUPERFAMILY Pentein 1 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0819 Lan-Chr7 7217852 7220946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0819 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 90.612 3.15e-172 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0819 K03264 - dcr:108209985 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0819 7 7217852 7220946 Lan8g0199 8 3385521 3388494 PCT
Lan7g0819 7 7217852 7220946 Lan20g0789 20 6793845 6797184 PCT
Lan8g0199 8 3385521 3388494 Lan7g0819 7 7217852 7220946 PCT
Lan20g0789 20 6793845 6797184 Lan7g0819 7 7217852 7220946 PCT