Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0781 ATGCCTTCTCTTCCTCTATCCAACGACGCCGTTTCCAACGACAAGAAACTCAAGAAGGAGAAGAAGATAAAAACCACCGACAATGTCGAGAACGTGAACGACACCGTTTCAGATAGCAAGAAGAAGAGTGGCTCCAAGGAGATCAAGAAGAAGCGGAAGAAGGTTTCATCATCTTCTGAAGAAGATGATGATGGTGAGAAGAGTGAGACTAGTTCCGATGTTGTTGAGGGTTTGAAAACGAAGGAGAAGAAGAAGAAGAGTAAGAAAGCGAAGGTGGAGATAGAAGAGGAAGAAGAGGTTGAGGCTGAAGTAGAAGTTGAGAATCCTAATGCGGTTTCCAATTTTAGGATTTCGGAACCGTTGAAGGCGAAGTTGAAGGAGAAGGGGATTGAAGCGTTGTTCCCGATTCAAGCTATGACCTTCGATATTATTCTCGACGGCGATGATTTGGTTGGTCGTGCTCGCACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCTATATTGGAGTCTTTAACAAATGGTCCAGCAAAAGCATCAAGAAAGTTGGGCTATGGGAGGTCTCCAAGTGTCGTTGTGCTTCTACCTACTAGGGAATTGGCCAAACAGGTGCATGCTGATTTTGAAGTTTATGGTGGGTCATTGGGATTGGTTTCTTGCTGTTTATATGGTGGAGCTCCATATCAGACTCAAGAGATTAAGCTCAAGAGGGGTGTTGATATTGTTATTGGCACACCTGGTCGCATAAAGGATCATATAGAGAGGGGAAATATTGATCTGAGCCTACTAAGGTTCCGTGTCCTCGATGAGGCTGATGAGATGCTGAGAATGGGTTTTGTTGAAGATGTTGAACTCATTCTAGGCAAAGTAGAGGACGTCAACAAAGTCCAGACACTTCTTTTCAGTGCTACTCTACCAGTCTGGGTTAAGCAGATTTCTACAAGATTTTTGAAACGTGATAAAAAAACTGCTGATCTTGTTGGGAATGAGAAAATGAAGGCTAGCAACAATGTTAGGCATATTGTTCTTCCATGTAATAGTTCTGCTAGGGCCCAGCTTATCCCTGACATTATTCGCTGTTATAGCAGTGGAGGCCGAACAATTATTTTTACTGAGAAAAAGGAGTCTGCCTCTGAGCTTGCAGGGGTCTTGCAGGGTGCAAGACCTCTCCATGGTGACATACAACAGTCCCAACGTGAGGTGACTTTGTCAGGTTTTAGGTCTGGAAAATTCCTCACATTGGTGGCCACAAATGTGGCAGCTAGGGGTCTCGATATCAATGATGTTCAGTTAATTATCCAGTGTGAACCTCCACGGGATGTAGAAGCATACATCCATCGTTCTGGACGTACCGGAAGAGCTGGTAATACTGGAATTGCTGTAATGCTTTATGATCCCAGAAAGTCAAGTGTATCTAGAATAGAGCGAGAATCAGGTGTTAAATTTGAACATGTATCGGCTCCTCAGTCTGATGATATTGCCAAAGCTGTTGGTGGGGAAGCTGCTGAATTGATTTTGCAAGTGTCTGATAGTGTGGTTCCTGCATTCACGTCTGCTGCTGAGGGGCTTTTGAATAACAGTGGTTTATCAGCTGTTGAATTACTTGCAAAAGCTCTTGCCAAGGCTGTTGGTTTTACTGAGATAGTGAAAAGATCACTTCTGACTTCCATGGAAAATTATGTCACATTACAGCTTGAGATTGGAAAACCTATTTTCACCCCATCTTTTGCATTTGGAATCCTGAGGAGATTCGTGCCCGAGGAGAAGGTTAACACAGTGCAGGGTCTTACTATCACTGCGGATGGAAATGGTGCTGTTTTTGACGTACCAGCAAAAGAGTTGGATGCATTTATTACTGGTCAGCAAAATGCTGCTAATGTAAGTCTGGAGGTGGTGAAAACATTGCCGCAGTTGCAAGAAAGAGAGCAGTCAAAAGTGAGCAGATATGGTGGTGGAGGTCGTGGGTTTGGTGGAAGTAGATTTGGTGGAAGAGGAGGCGGCAGGAATGGTAGATTTTCAGGTGGTTACGGTGGTGGGAGAGGTGGAAATAGATGGTAA 2058 0.4412 MPSLPLSNDAVSNDKKLKKEKKIKTTDNVENVNDTVSDSKKKSGSKEIKKKRKKVSSSSEEDDDGEKSETSSDVVEGLKTKEKKKKSKKAKVEIEEEEEVEAEVEVENPNAVSNFRISEPLKAKLKEKGIEALFPIQAMTFDIILDGDDLVGRARTGQGKTLAFVLPILESLTNGPAKASRKLGYGRSPSVVVLLPTRELAKQVHADFEVYGGSLGLVSCCLYGGAPYQTQEIKLKRGVDIVIGTPGRIKDHIERGNIDLSLLRFRVLDEADEMLRMGFVEDVELILGKVEDVNKVQTLLFSATLPVWVKQISTRFLKRDKKTADLVGNEKMKASNNVRHIVLPCNSSARAQLIPDIIRCYSSGGRTIIFTEKKESASELAGVLQGARPLHGDIQQSQREVTLSGFRSGKFLTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGIAVMLYDPRKSSVSRIERESGVKFEHVSAPQSDDIAKAVGGEAAELILQVSDSVVPAFTSAAEGLLNNSGLSAVELLAKALAKAVGFTEIVKRSLLTSMENYVTLQLEIGKPIFTPSFAFGILRRFVPEEKVNTVQGLTITADGNGAVFDVPAKELDAFITGQQNAANVSLEVVKTLPQLQEREQSKVSRYGGGGRGFGGSRFGGRGGGRNGRFSGGYGGGRGGNRW* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0781 685 SMART ultradead3 129 341 IPR014001 -
Lan7g0781 685 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 24 668 - -
Lan7g0781 685 SMART helicmild6 378 455 IPR001650 -
Lan7g0781 685 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 141 323 IPR014001 -
Lan7g0781 685 Gene3D - 57 323 IPR027417 -
Lan7g0781 685 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 267 275 IPR000629 -
Lan7g0781 685 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 352 494 IPR001650 -
Lan7g0781 685 MobiDBLite consensus disorder prediction 655 685 - -
Lan7g0781 685 CDD GUCT_RH7_like 551 636 - -
Lan7g0781 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 468 IPR027417 -
Lan7g0781 685 Pfam GUCT (NUC152) domain 544 639 IPR012562 GO:0003723|GO:0004386|GO:0005524
Lan7g0781 685 Pfam DEAD/DEAH box helicase 134 311 IPR011545 GO:0003676|GO:0005524
Lan7g0781 685 SUPERFAMILY RNA-binding domain, RBD 549 631 IPR035979 GO:0003676
Lan7g0781 685 Coils Coil 78 107 - -
Lan7g0781 685 CDD DEADc 121 319 - -
Lan7g0781 685 Gene3D - 559 634 - -
Lan7g0781 685 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 7 24 668 - -
Lan7g0781 685 Gene3D - 334 558 IPR027417 -
Lan7g0781 685 MobiDBLite consensus disorder prediction 12 44 - -
Lan7g0781 685 MobiDBLite consensus disorder prediction 1 90 - -
Lan7g0781 685 Pfam Helicase conserved C-terminal domain 356 455 IPR001650 -
Lan7g0781 685 CDD SF2_C_DEAD 338 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0781 Lan-Chr7 6858764 6865838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0781 147 461 Eukaryotic Initiation Factors Gene Family AT1G72730 29.781 1.06e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0781 K16911 - jre:108998595 905.975