Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0777 ATGTTTCCTTTACAACGAAGCAATGAGCTGGTGATCCAGTTTTCTAATACCCCTCACCAGCAAGATAGCCAATTCTTCGAAGATCTGGTTCTGGATAATTATGATTTTTTGGATGTCAATGATTCTGATAAAATATTCAGTAGTAGCCAACCGAAGAAACAAATTTATGGGACTGAAAAGAGTAATCATGGTGATTCTAACGAACATAAGAAGAAGAAGATGGTTCATAGAGAGATTGAGAGGCAAAGGAGGCAAGAAATGGCTACACTCCATGCCTCTCTTAGATCCCTTCTTCCTCTTGAGTTCATCAAGGGAAAGCGTTCACTATCTGATCAAATGAACGGGGCAGTGAATTATATAAAGCAGATGCAGGAGAATATCAAAGAACTTGGTGCCAAGAGAGATGAACTGAAGAAACTCTCAAATTCAAACCTGGAAAACCATGAGAGTAACCATGCTTCTAGCAACTTTACTGTCCATGAGAATAATGGTATTCTGAGAATTGAAGTCACCATTGGCTTCATAGAGGAAAGGCCCACACTTTCAAAATTGCTGCAGTTACTTGTTGAAGAAGGACTTGAAGTTATTAATTGCCTTTCAACTGAAATCAATGGAAGATTGCTCCACAGTGTCCACTGTGAGGTTAACAAATCCAACAGTGTAGATCTATCTGAGCTGAGATGGAAAATTGCCAATCTAATTGCATCATAA 711 0.3882 MFPLQRSNELVIQFSNTPHQQDSQFFEDLVLDNYDFLDVNDSDKIFSSSQPKKQIYGTEKSNHGDSNEHKKKKMVHREIERQRRQEMATLHASLRSLLPLEFIKGKRSLSDQMNGAVNYIKQMQENIKELGAKRDELKKLSNSNLENHESNHASSNFTVHENNGILRIEVTIGFIEERPTLSKLLQLLVEEGLEVINCLSTEINGRLLHSVHCEVNKSNSVDLSELRWKIANLIAS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0777 236 CDD bHLH_AtORG2_like 72 148 - -
Lan7g0777 236 MobiDBLite consensus disorder prediction 58 75 - -
Lan7g0777 236 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 236 - -
Lan7g0777 236 MobiDBLite consensus disorder prediction 48 75 - -
Lan7g0777 236 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 236 IPR015660 GO:0003700|GO:0006357
Lan7g0777 236 Coils Coil 120 140 - -
Lan7g0777 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 137 IPR036638 GO:0046983
Lan7g0777 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Lan7g0777 236 SMART finulus 77 129 IPR011598 GO:0046983
Lan7g0777 236 Pfam Helix-loop-helix DNA-binding domain 72 124 IPR011598 GO:0046983
Lan7g0777 236 Gene3D - 62 152 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0777 Lan-Chr7 6835777 6837396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0777 73 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 43.860 1.55e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan7g0777 HLH 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0777 - - gmx:100780888 299.671