Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0731 ATGTCTTCCTCACAATTCTATGGTAAAGTAGATGAATCTGAGCATGCTATGCTCCAAGTTCGCCAAAGAACTCGAAAAAGAATCACTATCATAGCATTGTCTACAATAGTCCTTGTTGCTGTTGTATGTGCTGCTGTGTTTGGAACTGTTGCTCACAAAAATGCTCATGATAATTCAAATGGTAATGGCAATAATGGTGAACCTATATCCAACGCTGTGAAAGCTGTTTGTGATGTGACTTTATACAAGGATGCATGTTATAGAAGCTTTGGTCCTTTGGTGCAGTCAGATCATCTTACACCTGAGGATTTGTTCAAGTTATCAATCCAAGTGGCTTTGGTTGAGGTTTCCAATGCTGTTCAGAAATTCTCTGATCAGGGTTATTTTGAGGGGTTAAATAGTGATAATAGGACCAAGGAAGCTTTGAATAATTGCAAGGATCTTTTGGGTCTTGCTGTTGATCATCTTAATAGTTCTTTGTCTTCTGAGGGAAACTCTTCCTTGTTTGATGTTTTTGATGATCTTACAACTTGGTTGAGTGCTGCAGGTACTTACCAGCAGACATGCATTGATGGATTGGAGGAAACAAAACAAACATTGAAGAACACTGTTGAGAGCTACCTCCAAAACTCTACAGAGTTCACTAGTAACAGTCTTTCAATCATAACATGGATTAACAATGCTGCAAACACAGTAAACTTGAGGCGCTTATTGAGTTTACCTTATCAAAATGAAGAACCAAAGTGGCTTCATTCCAAAGACAGGAAGCTACTTCAAACAGTTGATTTGAAAAAGAAAGCTGATATTGTTGTGGCCAAAGATGGCAGTGGAAAATATAGAAAAATTTCTGATGCACTTAAAGCTGTCAAAGATAAAAATAAGAAGAGGACTGTGATATATGTGAAGAAAGGGATTTACTATGAAAATGTTAGGGTGGAGAAGAACAAATGGAATGTAATGATCATTGGTGATGGTATGAGTGCTTCAATTGTATCTGGCAGTCTTAACTTTGTGGATGGTACCCCAACATTTTCATCTGCAACATTTGCTGCATTTGGGAAGAATTTCATTGCTAGGGACATGGGATTTCGCAACACAGCAGGTCCACAAAAGCATCAAGCAGTGGCAGTAATGACAGGTTCTGATCAATCAGTTTACTATAGGTGTCAATTTGATGCATTTCAAGACACTCTCTATGCCCACTCCAATCGCCAATTCTACAGAGAATGCAACATTTATGGAACAGTTGATTTCATTTTTGGAAACTCTGCAGTTGTAATACAAAACTCCAACATTCTGCCTAAGGCTCCTATGAAAGGCCAACAGAACACAATCACAGCACAAGGCAAAAGTGACCCTAACATGAACACAGGAATCTCAATTCAGAATTGCACCATTTCACCCTTTGGGAACTTAAATTCTGTCCAAACTTTCCTTGGAAGGCCTTGGAAGACTTACTCAACCACAGTGTTTATTCAGTCTCATATTGCAAGCTTCATTAACCCAAAGGGTTGGTTACCATGGGTAGGGAATTCAGCACCAGATACCATATTTTATGCAGAGTATCAGAATGATGGACTAGGTGCTTCAACAAAGAATAGGGTGAAGTGGAAGGGTTTGAAAACCACCCTTAATAGTAATCAAGTTAACAAGTTTACTGTCAAGGCCTTTCTTTCAGGAGACAAATGGATTCCGGCTTCGGGTGCCTCCTATAAATTATCTCTGTGA 1728 0.39 MSSSQFYGKVDESEHAMLQVRQRTRKRITIIALSTIVLVAVVCAAVFGTVAHKNAHDNSNGNGNNGEPISNAVKAVCDVTLYKDACYRSFGPLVQSDHLTPEDLFKLSIQVALVEVSNAVQKFSDQGYFEGLNSDNRTKEALNNCKDLLGLAVDHLNSSLSSEGNSSLFDVFDDLTTWLSAAGTYQQTCIDGLEETKQTLKNTVESYLQNSTEFTSNSLSIITWINNAANTVNLRRLLSLPYQNEEPKWLHSKDRKLLQTVDLKKKADIVVAKDGSGKYRKISDALKAVKDKNKKRTVIYVKKGIYYENVRVEKNKWNVMIIGDGMSASIVSGSLNFVDGTPTFSSATFAAFGKNFIARDMGFRNTAGPQKHQAVAVMTGSDQSVYYRCQFDAFQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNSNILPKAPMKGQQNTITAQGKSDPNMNTGISIQNCTISPFGNLNSVQTFLGRPWKTYSTTVFIQSHIASFINPKGWLPWVGNSAPDTIFYAEYQNDGLGASTKNRVKWKGLKTTLNSNQVNKFTVKAFLSGDKWIPASGASYKLSL* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0731 575 CDD PMEI-like_3 75 225 - -
Lan7g0731 575 Coils Coil 190 210 - -
Lan7g0731 575 PANTHER PECTINESTERASE 5 572 - -
Lan7g0731 575 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Lan7g0731 575 Gene3D - 263 575 IPR012334 -
Lan7g0731 575 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 225 IPR035513 -
Lan7g0731 575 Pfam Plant invertase/pectin methylesterase inhibitor 72 221 IPR006501 GO:0004857
Lan7g0731 575 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 227 IPR035513 -
Lan7g0731 575 PANTHER PECTINESTERASE 5 572 - -
Lan7g0731 575 SMART PMEI_2 68 221 IPR006501 GO:0004857
Lan7g0731 575 Pfam Pectinesterase 268 561 IPR000070 GO:0030599|GO:0042545
Lan7g0731 575 TIGRFAM PME_inhib: pectinesterase inhibitor domain 66 225 IPR006501 GO:0004857
Lan7g0731 575 SUPERFAMILY Pectin lyase-like 266 571 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0731 Lan-Chr7 6244721 6248251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0731 4 575 Carbohydrate Esterase AT3G10710 55.923 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0731 - - gmx:100816529 862.062