Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0730 ATGTTAACACCTTCATTGTCCTTCTTTCTTCTCTTCCTCTTTGTACCATTACTCCTAGGTCAACCTCCAACCCCTCCTCCTTCTCCCTCTTCAGTATGCAAATCCACACTCTATCCAAAACTATGTCGTTCCATTATCTCATCCATTGGTTCCTCCCCTTCTGATCCATACCACTTAGGCAAATTCTCCATCAAACAAAGCCTCAAACAAGCCAAGAAACTAGCCAAAGTGTTTCAAGATTTCCTCAAAAAGAAGCATAACTCTTCTTCTCTTAACCATGCAGAGGTTGCAGCACTTGATGATTGCAGTGAGCTCAACCACCTCAACGTGGATTACTTAGAATCAGTGTCAGAAGCGCTTAAATCTGCTGATTATAATTCTTCATCAAGCGAGGAGTTGGTGGAAACTATTGAAACATATCTCAGTGCTGTGGCCACTAACCATTACACTTGCTATGATGGGTTGGTGGTGACCAAGAGTGAAATTGCAAATGCACTTGCTGTGCCTCTCTCCAATGTTACACAACTATATAGTGTGTCGCTTGGATTGGTTACACAGTCTCTGAACAAAAACCTCAAAAAACATAAGACCCGTAAACATGGCCTTCCCACCAAGGATTTCAAGGTCAGGCAGCCACTTGAAAAGCTCATTAAGACTGTTCGCAAAGAGTTTCATTGCAAAAAATCATCGAATTGTACTAGAAGTGAAAGGATTCTGAAACAAAGTGAAAGCAAAGGAATATTGCTGAATGAATTTGTTGTTGTGAGCCTTGATGGAACACACAACTTCACTTCCATTGAAGATGCTGTTTCTGCTGCACCTAATGACACAAAACCAGAAGATGGTTATTTCCTTATATATGTCACAGAAGGATACTATAATGAATATGTCATTGTTCCCAAACACAAGAAGAATATCTTGCTTATAGGAGATGGTATCAACAACACTGTCATCACAGGGAATCATAGTGTTATAGATGGCTGGACAACTTTCAATTCTTCAACCTTTGCTGTTTCTGGAGAAAATTTCATTGCTGTGGATGTAACATTCAGAAACACAGCAGGCCCTACAAAGCACCAAGCAGTAGCTGTGAGGAACAATGCAGACCTATCTGTCTTCTACCGTTGTAGTTTTGAAGGATACCAAGACACTCTCTATGTTCACTCTCTCAGGCAATTCTATAGAGAATGTGATATCTATGGCACTGTGGATTTCATTTTTGGCAATGCTGCTGTAGTTTTCCAAAAGTGTAACATCTATGCCAGAAAATCATTGCCAAACCAGAAGAATGCTATCACAGCACAAGGGCGAAATGATCCAAACCAAGTAACTGGAATTTCCATACAAAATTGTAAAATTGATGCTGCACCAGATTTGGCAGCAGAGATAAATTCCACAGAAAACTACTTAGGTAGGCCATGGAAACAGTATTCAAGGACTGTATACTTGCAATCATACATTGGAGATCTGATTCATCCTTTGGGTTGGTTAGAGTGGAATGGCACAGTTGGATTAGACACACTTTTTTATGGTGAGTTCAAAAACCATGGACCAGGTTCTAATACCCACAAAAGGGTACAATGGCATGGTTACAATCTGTTGAATGCTACACAAGCTTGGAACTTTACTGTCCTTAATTTTACCTTGGGGAATACATGGCTACCCAACACAGATATACCCTATGCTGAAGGTCTACATTAG 1701 0.4027 MLTPSLSFFLLFLFVPLLLGQPPTPPPSPSSVCKSTLYPKLCRSIISSIGSSPSDPYHLGKFSIKQSLKQAKKLAKVFQDFLKKKHNSSSLNHAEVAALDDCSELNHLNVDYLESVSEALKSADYNSSSSEELVETIETYLSAVATNHYTCYDGLVVTKSEIANALAVPLSNVTQLYSVSLGLVTQSLNKNLKKHKTRKHGLPTKDFKVRQPLEKLIKTVRKEFHCKKSSNCTRSERILKQSESKGILLNEFVVVSLDGTHNFTSIEDAVSAAPNDTKPEDGYFLIYVTEGYYNEYVIVPKHKKNILLIGDGINNTVITGNHSVIDGWTTFNSSTFAVSGENFIAVDVTFRNTAGPTKHQAVAVRNNADLSVFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQKCNIYARKSLPNQKNAITAQGRNDPNQVTGISIQNCKIDAAPDLAAEINSTENYLGRPWKQYSRTVYLQSYIGDLIHPLGWLEWNGTVGLDTLFYGEFKNHGPGSNTHKRVQWHGYNLLNATQAWNFTVLNFTLGNTWLPNTDIPYAEGLH* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0730 566 Gene3D - 251 566 IPR012334 -
Lan7g0730 566 SUPERFAMILY Pectin lyase-like 251 564 IPR011050 -
Lan7g0730 566 CDD PMEI-like_3 32 185 - -
Lan7g0730 566 Pfam Pectinesterase 253 550 IPR000070 GO:0030599|GO:0042545
Lan7g0730 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 187 IPR035513 -
Lan7g0730 566 PANTHER PECTINESTERASE 7 565 - -
Lan7g0730 566 PANTHER PECTINESTERASE 7 565 - -
Lan7g0730 566 Pfam Plant invertase/pectin methylesterase inhibitor 30 182 IPR006501 GO:0004857
Lan7g0730 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
Lan7g0730 566 SMART PMEI_2 24 183 IPR006501 GO:0004857
Lan7g0730 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 186 IPR006501 GO:0004857
Lan7g0730 566 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0730 Lan-Chr7 6239865 6244382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0730 32 565 Carbohydrate Esterase AT3G10720 60.482 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0730 K01051 - gmx:100808277 868.996