LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan7g0722	ATGAGACGAGTGAAGAATAATGAGATTGAAGATGAGATGCTCCCCAATGATCTGACAGAGTCACAGTTGAATGATGAGGGTGATGGAGGAAGTGCCAGTGGAGTTATTCTGAAGAAAGGTCCATGGACATCTACTGAAGATGCGATTTTGGTTGAATATGTGAAGAAGCACGGGGAGGGGAACTGGAATGCTGTTCAGAAGCATTCAGGCCTGTCACGTTGTGGAAAAAGTTGCCGATTGCGGTGGGCCAATCACCTAAGGCCAAATTTAAAGAAAGGGGCGTTTACTGCACAAGAGGAGCGGTTGATTACTGAACTTCACGCAAAAATGGGAAACAAGTGGGCACGCATGGCGGCACACTTGCCTGGTCGCACTGACAATGAGATAAAGAACTATTGGAACACCCGAATCAAGAGGCGTCAACGGGCTGGCTTGCCACTTTATCCTCCTGAAGTGTGTTTGCAAGCATTCCAAGAGAGTCAACAAAGGCAAAGCACTGGTGGAGGACATAATGCTGGCAATAAAGTGCGTCATGATTTCTTGCACAAAAACAGTTATGAGATACATGATGCAATATTTGACAGTTTGAAGGATAACCAGGGAATCTCACCTTATGTGCCTGAGCTTCCTGATATTTCTGATTATAGCAATATGCTGAAAGATCTTGATTCTTCTCAGTACTTTAATTTTGCGCCGTCAACATCACCTAACCATAAGCGTCTTCGAGAGTCAACAATGCCATTTCTTGGTTCTAGTGATATGCACAGAAATGTGTTTTATCCATTTGATCATATTCAGGATAATGCCTCATTTGGAATGCAATCACCCCTTGATCATGGTCCCTCCTCACACAGCTCAATGTGTTACAGCCATTCATTTTCAAATGGCAATTCCTCTACTTCAAAGTCTACTTATGAGGCTGTGAAGCTGGAGCTCCCTTCACTCCAATATCCGGAAATTGATTTAGGTAGCTGGGGTACATCTCCCCCACCTCCTTTGCTTGATTCGGTTGATGATTTCATTCAGTCTCCTACACCAATTAGTGCAATGGAGTCAGATAGTTCTTCCCCACATAATAGTGGCCTTCTGGATGCTTTAGTTTATCAGTCAAAGACTATGAGCAGCTCCAAGAACCATTATTCTAACAAGAGTTCAAACTCATCTACTGCAACTCCTGGTCACAGAGCAGACAGCTCCACGTTGAACATGTACGAGACAGAACTGGAAGACCATACTGACCCTGTATCTCCATTTGGTGCAACTTCAATATTGAATGAATGCCCTGCTGTTGCCAATGCAAATTCATTTGATGAAACGCTGCCCGATGGGACCTTCAATGGTAACATCGTGAAATTAGAGTCTGCTGACCAGGTTTGGACCCCGAACAGTGAAAATCAAAACATGTCTGAATTGAATATTACTAGGCCAGACTTGTTGCTTGATGCAGATTGGCTCCAACAGGATTTTGGGCATGGCAACAACCAAACCATCACAACCGATGTTATGTCAACCCTTTTTGCAGATGATTTAGCCACTGACTACAAGCATATGACTGTTGGAACTTCTAAGTCGAGTCAGGTATGGGGCTTTGGTTCTTGTGCTCGGAACAACAATGTCTTCTGTCTATCAGGTGTCTGA	1638	0.4389	MRRVKNNEIEDEMLPNDLTESQLNDEGDGGSASGVILKKGPWTSTEDAILVEYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAQEERLITELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLQAFQESQQRQSTGGGHNAGNKVRHDFLHKNSYEIHDAIFDSLKDNQGISPYVPELPDISDYSNMLKDLDSSQYFNFAPSTSPNHKRLRESTMPFLGSSDMHRNVFYPFDHIQDNASFGMQSPLDHGPSSHSSMCYSHSFSNGNSSTSKSTYEAVKLELPSLQYPEIDLGSWGTSPPPPLLDSVDDFIQSPTPISAMESDSSSPHNSGLLDALVYQSKTMSSSKNHYSNKSSNSSTATPGHRADSSTLNMYETELEDHTDPVSPFGATSILNECPAVANANSFDETLPDGTFNGNIVKLESADQVWTPNSENQNMSELNITRPDLLLDADWLQQDFGHGNNQTITTDVMSTLFADDLATDYKHMTVGTSKSSQVWGFGSCARNNNVFCLSGV*	546

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan7g0722	545	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	87	141	IPR017930	-
	Lan7g0722	545	SMART	sant	91	139	IPR001005	-
	Lan7g0722	545	SMART	sant	38	88	IPR001005	-
	Lan7g0722	545	SUPERFAMILY	Homeodomain-like	38	133	IPR009057	-
	Lan7g0722	545	Gene3D	-	38	91	-	-
	Lan7g0722	545	MobiDBLite	consensus disorder prediction	1	37	-	-
	Lan7g0722	545	MobiDBLite	consensus disorder prediction	341	361	-	-
	Lan7g0722	545	PANTHER	TRANSCRIPTION FACTOR MYB33-RELATED	1	537	-	-
	Lan7g0722	545	ProSiteProfiles	Myb-like domain profile.	37	86	IPR001005	-
	Lan7g0722	545	PANTHER	TRANSCRIPTION FACTOR, PUTATIVE-RELATED	1	537	-	-
	Lan7g0722	545	ProSiteProfiles	Myb-like domain profile.	87	137	IPR001005	-
	Lan7g0722	545	Gene3D	-	94	140	-	-
	Lan7g0722	545	MobiDBLite	consensus disorder prediction	323	361	-	-
	Lan7g0722	545	Pfam	Myb-like DNA-binding domain	39	86	IPR001005	-
	Lan7g0722	545	Pfam	Myb-like DNA-binding domain	92	135	IPR001005	-
	Lan7g0722	545	MobiDBLite	consensus disorder prediction	374	397	-	-
	Lan7g0722	545	CDD	SANT	41	86	IPR001005	-
	Lan7g0722	545	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	34	86	IPR017930	-
	Lan7g0722	545	CDD	SANT	94	135	IPR001005	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan7g0722	Lan-Chr7	6137594	6142125	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan7g0722	36	537	MYB Transcription Factor Family	AT3G11440	42.939	4.83e-120	363

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Lan7g0722		Myb_DNA-binding	2.9e-15	CL0123