Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0709 ATGGAAGAGGGAAAACCTGGGATTGGTTTGGCAGATAATGGTGACAAATCTGACACTCGATTCGCCGAATTCTGCAAGAATGGACTAGCATTAGATGAGAAAAGCTGTAAAGAAGCAATGAATCTGTTTGGACAAACCAAACATCTTCTACTGTCAAATGTTTCGTCAGTGGGGATTGGAACGTCTGAAGAAGCAGAGCGGTATTGGTTTGCTTTTATTTTATACTCTATCAAGAGATTGAATCAGAAAAATGAGGAGATCGGGAAGGAAGAGATTGATTACACTGGACTTACCTTGTGCCGAATAATGAGAGCAGCTAAGCTTAACATTGCAGATTTTTTCAGAGAACTTCCTCAATTTGTTGTTAAGGCTGGTCCAATTTTAAGTAATATATATGGCACGGATTGGGAAAACAAACTTGAGGCGAAGGAGATGCATGCCAATGCCATTCACTTAAAGATTCTTAGCAAGTACTACAAACGAGTATTTGGAGAGTTCTTCGTGGTGACTGATTCAAATGTTGAAAAGAGCTCATCTGCGACTGTTCATGCATCTGAATACCTCCGCTTTGGATGGTTACTTTTCTTGGCACTTCGTGTGCATGCTTTCAGTCGTTTCAAAGACTTGGTGACTTCCACCAATGGTTTAATTTCGATATTGGCTATCTTGGTTATTCATGTTCCTGCTCGCTTTCGGAATTTCAACATTAATGACTCAACTCGCTTTGTTAAGAGAAGTAACAGAGGTGTCGACCTCCTTGCATCACTTTGCAACATTTATAACACTTCAGAAGATGAGTTGAGGAAAACCATGGAGAAAGCCAATAATTTAATTGCAAATATATTGAAGAAGAAGCCCTGTTTGGCATCTGAATGTGAAATTGAAAACCTAGAGAACTTTTATAAAGATGATTTGACCTATTTTAATGATCTAATGGAGGAATTGTCTCTGCTATCCAATTTAAATATCTTAGAAAAGGATTATGATGACATGATTGGCAACAAAGGTGAATTGGATGAGAGGTTGTTCATTAATGAGGAAGACAGTTTGTTAGCATCTGGAAGCTTGTCTGGAGGTTCTGTTTCAGCAAGCGGTGTAAAGAAAAAATTCGATTTGATGTCATCTCCTGTTAAGACTATTCCAAGTCCACTCTCACCCCACCGCTCTCCTGCGTCTCATTCCAATGGTGTTCCTGGTACTGCAAATTCAAAGATGGCAGGCACCCCTGTAAGCACGGCAATGACTACTGCAAAGTGGCTTCGTACTGTCATTTCTCCACTTGCATCAAAGCCCTCACAAGAGCTGGAGCGATTCTTGACATTGTGTGACAAGGATGTTACAAGTGATGTGGTGCGCAGAACGCAGATTATTTTGCAGGCTATATTTCCTAGTAGCCCTCTTGGAGAAAGATGTGTAACTGGAAGTCTGCAAAGTGCAAATCTCATGGACAATATTTGGGCAGAACAGCGAAGATTGGAAGCCCTGAAGTTATACTATAGGGTACTGGAGGCAATGTGCAGAGCAGAAGCTCAAATACTCCATACAACTAATTTGACCTCACTACTGACTAATGAGAGGTTCCATCGGTGTATGCTCGCGTGTTCTGCAGAATTAGTCCTGGCAACTCACAAGACAGTGACAATGTTGTTCCCTGCGGTGCTGGAAAGGACTGGAATTACGGCTTTTGATCTTAGCAAGGTGATTGAAAGTTTTATTAGACATGAAGAATCTCTCCCTAGAGAGTTGAGGCGGCATTTGAATTCATTGGAAGAACGACTCTTAGAGAGCATGGTCTGGGAAAAGGGTTCATCAATGTATAATTCCTTAGTGGTTGCTAAACCTGCCCTCTCTGCAGAAATAAATCGTCTTGGACTGTTAGCTGATCCAATGCCATCATTGGATGAAATTGCAATGCATATCAACTTCTCTTGTGGAGGGTTGCCTCCTTTGCCTTCCTTGCCTAAGCTTGAGTCCTCGCCAACTCAGAATGGGGATATGAGATCACCAAAGCGACTCTGTACTGAATATCGAAATTTGTTGGTTGATCGAAATTCTTTCACTTCACCGGTGAAAGACCGGCTACTTCACTTCAGCAACCTTAAGTCAAAGCTACCCCCACCTCCTTTGCAATCTGCTTTTGCAAGTCCAACAAAACCAATTCCAGGAGGCGGAGGAGAAACATGTGCAGAAACTGGTATCAACATCTTTTTCAGCAAGATAATTAAGTTGGGAGCAGTCAGAATAAGTGACATGGTTGAAAGGCTACAATTATCTCAGCAGATAAGGGAGAATGTATACCGTCTTTTCCAGAAAATCCTTAATCAATGCACATCTCTCTTCTTCAACCACCATATTGACCAAATCATTTTGTGTTGCTTATATGGAGTTGCAAAGATTTCTCAATTGAACCTAACTTTCAGGGAGATCATAAACAACTATAGAAAGCAACCACAATGCAAACTACAAGTTTTTCGCAGTGTATTTGTTGATTGGTCATTGACACACCGTAAAGGGAGAGCTGGACAGGAGCATGTTGACATCATTACATTTTACAATGAATTATTCATTCCATCTGTAAAGCCGCTGCTAGTTGAACTTGGCCCTGGGGAAACAAATATGAAAAGCAACCGGATACCTGAAGTTAATAATAAAAATGATGGCCATTTGGCTCAATGTCCTGGGTCGCCTAAAATATGTCCTTTCCCGAGCCTTCCTGATATGTCTCCAAAAAAAGTGACTTCCTCACGCAATGTTTATGTTTCACCATTACGATCATCTAAGATGGATGCTCTAATATCACATAGCTCAAAAAGTTATTATGCATGTATTGGGGAGAGCACTCATGCATATCAAAGCCCTTCAAAAGACTTGACTGCCATCAATAACCGTTTGAACAGGAAGGTCAGAGGTCCTCTGAATTTCGATGAAGTCGATGTCGGTTTGGTTAGTGACTCTCTGGTTGCAAACAGCTTCTATCTACAGAATGGAACTTGTGCATCATCATCAGGTGCCCCATTGAAGCCTGAGCAACCTGACTCGAATTAA 3045 0.4122 MEEGKPGIGLADNGDKSDTRFAEFCKNGLALDEKSCKEAMNLFGQTKHLLLSNVSSVGIGTSEEAERYWFAFILYSIKRLNQKNEEIGKEEIDYTGLTLCRIMRAAKLNIADFFRELPQFVVKAGPILSNIYGTDWENKLEAKEMHANAIHLKILSKYYKRVFGEFFVVTDSNVEKSSSATVHASEYLRFGWLLFLALRVHAFSRFKDLVTSTNGLISILAILVIHVPARFRNFNINDSTRFVKRSNRGVDLLASLCNIYNTSEDELRKTMEKANNLIANILKKKPCLASECEIENLENFYKDDLTYFNDLMEELSLLSNLNILEKDYDDMIGNKGELDERLFINEEDSLLASGSLSGGSVSASGVKKKFDLMSSPVKTIPSPLSPHRSPASHSNGVPGTANSKMAGTPVSTAMTTAKWLRTVISPLASKPSQELERFLTLCDKDVTSDVVRRTQIILQAIFPSSPLGERCVTGSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQILHTTNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLVVAKPALSAEINRLGLLADPMPSLDEIAMHINFSCGGLPPLPSLPKLESSPTQNGDMRSPKRLCTEYRNLLVDRNSFTSPVKDRLLHFSNLKSKLPPPPLQSAFASPTKPIPGGGGETCAETGINIFFSKIIKLGAVRISDMVERLQLSQQIRENVYRLFQKILNQCTSLFFNHHIDQIILCCLYGVAKISQLNLTFREIINNYRKQPQCKLQVFRSVFVDWSLTHRKGRAGQEHVDIITFYNELFIPSVKPLLVELGPGETNMKSNRIPEVNNKNDGHLAQCPGSPKICPFPSLPDMSPKKVTSSRNVYVSPLRSSKMDALISHSSKSYYACIGESTHAYQSPSKDLTAINNRLNRKVRGPLNFDEVDVGLVSDSLVANSFYLQNGTCASSSGAPLKPEQPDSN* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0709 1014 Coils Coil 260 284 - -
Lan7g0709 1014 Pfam Domain of unknown function (DUF3452) 95 226 IPR024599 -
Lan7g0709 1014 SUPERFAMILY Cyclin-like 731 870 IPR036915 -
Lan7g0709 1014 SMART DUF3452_2 80 226 IPR024599 -
Lan7g0709 1014 MobiDBLite consensus disorder prediction 381 407 - -
Lan7g0709 1014 Pfam Retinoblastoma-associated protein B domain 733 860 IPR002719 GO:0005634|GO:0051726
Lan7g0709 1014 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 5 1000 IPR028309 GO:0006357|GO:0051726
Lan7g0709 1014 Pfam Retinoblastoma-associated protein A domain 408 609 IPR002720 GO:0005634|GO:0051726
Lan7g0709 1014 PANTHER BNACNNG22930D PROTEIN 5 1000 - -
Lan7g0709 1014 SMART RB_A_2 408 609 IPR002720 GO:0005634|GO:0051726
Lan7g0709 1014 SMART cyclin_7 746 864 IPR013763 -
Lan7g0709 1014 Gene3D - 689 884 - -
Lan7g0709 1014 Gene3D - 411 599 - -
Lan7g0709 1014 Gene3D - 187 345 - -
Lan7g0709 1014 SUPERFAMILY Cyclin-like 416 611 IPR036915 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0709 1 1013 Core Cell Cycle Gene Families AT3G12280 67.055 0.0 1367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Lan7g0709 RB_A 4e-64 CL0065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0709 K04681 - gmx:100779266 1681.77