Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0682 ATGGAACTTAGCACTTACTTCAACATGGACTTGGACTTTCATCAAACTCCCAACTCATCAGAAATGAGCAGAATTGCACCACAAGAACAATGCTACGACCTTTATCAAGATGAGAGCTTTTTCCTTCCGAACACTTTCATTGATCCCTATTTTGACCCAACAAGTTTTCTTTACCCAGAAATCTACCCTCACCTCCTTCCTTATGACCCTATCATATCACTCTCTGATATCTTCCCTAATGAAGAAAATCATTGCAACCTCCTTCCATACCCAAAACGCCAAAAATGCTTCCATGAAGAACAAGATCACTCTTCAAACAACAATTTCATTGTGCCAAATGATCCCTTGCCAGAAGAGGAACTTCTACTACCTATACCACTACCAGAACTACCGGAACAACACTTCATTGATGCAATGCCAGAGTTTCAAGTTCCACAACTTCCACCATATAACTTTGGGGCATATGATGCTGGCTATGAGAATGAGTATGAGAGGAAAAGTAAGGAGAAAAGAACCATATCAGCACAAAGCATAGCGGCGCGAGAAAGGAGAAGGAAGATCACTAATAAGACACAAGAGCTTGGGAAGTTGGTTCCTGGTGGTTCAAGGATGAACACAGCTGAGATGTTGAATGCAGCTGGCAAGTATGTTCACTACTTGCAGACTCAAGTTCAAATGCTTCAACTTATGAACACACTTCAGGAAGATAAGGAATCATGTCCAACTGAAAATCTGCATGCCCTGCTTGGCTCTCACAGTGTTCAAGAGAAGATGTATTCAGAGGAAAAGTGCATTGTTCCAAAAGACTTCATTGCCACTTTGACAAATCATGCCAATTTTCAATCAAGACCTTCCATCCTTAAAGATCTTAAGCAGTTGATTGGGACTGGCATTGAAGAGAAAGCAAAGCAAGAATAA 918 0.4096 MELSTYFNMDLDFHQTPNSSEMSRIAPQEQCYDLYQDESFFLPNTFIDPYFDPTSFLYPEIYPHLLPYDPIISLSDIFPNEENHCNLLPYPKRQKCFHEEQDHSSNNNFIVPNDPLPEEELLLPIPLPELPEQHFIDAMPEFQVPQLPPYNFGAYDAGYENEYERKSKEKRTISAQSIAARERRRKITNKTQELGKLVPGGSRMNTAEMLNAAGKYVHYLQTQVQMLQLMNTLQEDKESCPTENLHALLGSHSVQEKMYSEEKCIVPKDFIATLTNHANFQSRPSILKDLKQLIGTGIEEKAKQE* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0682 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Lan7g0682 305 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 1 290 - -
Lan7g0682 305 Pfam Helix-loop-helix DNA-binding domain 177 221 IPR011598 GO:0046983
Lan7g0682 305 Gene3D - 166 240 IPR036638 GO:0046983
Lan7g0682 305 SMART finulus 177 226 IPR011598 GO:0046983
Lan7g0682 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 232 IPR036638 GO:0046983
Lan7g0682 305 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0682 Lan-Chr7 5717833 5719537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0682 80 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 38.182 4.58e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan7g0682 HLH 6.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0682 - - lang:109363529 400.208