Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0678 ATGGCCTATATATTGAAGACTCAAAAGGAAGAGCAAAACCAACACATAAACATCTACATCCCAAATCCTCAGCCATTTTCCATGCCCCTCTCTCCTTCTCTAATGGCCTCTATTCCTCAATTCTATTCAAACAACACATTCTCTACTACTGATATCACAGAATTCAATAGTAATACCTCAGTCATGGACAATACAATGTGGTGTGAAGATAACATGAACTTCATTCCTGTGTATGATCATTATGGAGCACTTAATAATCATCACGCTGTGTTACAGGATTGGATGCCTGCTATTTCAGACTGCAAAATGGATGAGGGTGGCATTGGAAGTTATCAGAACTTCAGCTATGGATACCAACCTCATATTAGTGACTTTGATGAGGACATTAAGCCACCTAATAATGCCACACAAAACTGGCAGGGAATTCATGGTGATCAAATGCCAGCAGGAGAGGAATCAAATAATATAAAAGTGGAAAGATACTCAGAAGAGGAAAGAAAGGAAAGAATTCTCAGATATTTGAAGAAAAGAAATCAAAGGAACTTTAACAAAACCATCAAGTATGCATGCAGAAAAACTTTAGCTGATAGGCGAGTCAGGGTTAGGGGAAGGTTTGCAAGAAACAATAATGACCTATCTGCAGAAGACAAGGCAACAAAGAATCTAGAGAATAATAATAATCACAAAGAGGACTTGTATGGTGATCATTCAATCCAATTCCAGTTAAAGATTAATGATGATGGTGATGATTGGCTCTACGAGGCCATGGCAAGTCTGGTTTATCTATCTCATTCTTCCATGGATGATATATAG 813 0.3788 MAYILKTQKEEQNQHINIYIPNPQPFSMPLSPSLMASIPQFYSNNTFSTTDITEFNSNTSVMDNTMWCEDNMNFIPVYDHYGALNNHHAVLQDWMPAISDCKMDEGGIGSYQNFSYGYQPHISDFDEDIKPPNNATQNWQGIHGDQMPAGEESNNIKVERYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNNDLSAEDKATKNLENNNNHKEDLYGDHSIQFQLKINDDGDDWLYEAMASLVYLSHSSMDDI* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0678 270 Pfam CCT motif 166 208 IPR010402 GO:0005515
Lan7g0678 270 ProSiteProfiles CCT domain profile. 166 208 IPR010402 GO:0005515
Lan7g0678 270 PANTHER ACTIVATOR OF SPOMIN::LUC2 35 265 - -
Lan7g0678 270 MobiDBLite consensus disorder prediction 210 229 - -
Lan7g0678 270 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 35 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0678 Lan-Chr7 5650360 5652203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0678 142 215 Response Regulator Gene Family AT5G61380 41.333 5.05e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan7g0678 CCT 8.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0678 - - vra:106761508 262.692