Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0667 ATGGGGGATGGAAGATCAGCATGTTGTGATAAGAATCAAGTTATGAGAGGCCCTTGGAGTTCTGCAGAAGACTTGAAGTTGATAACTTTCATTCAAAATTATGGCCATGATAATTGGCGTGCTCTCCCCAAAAGAGCTGGATTAATGCGATGTGGGAAAAGTTGTCGTTTGAGATGGGTAAATTATCTTAAGCCTGGTTTGAAGAGAGGGAATTTCACAAAAGAGGAAGTGGAAACTATAGTTAAGCTACAAGAGGCTTTGGGAAACAAGTGGTCAAAGATTGCTTCCCATTTACCAGGTAGAACAGACAATGAGATTAAAAATGTATGGAATACCCACTTGAAGAAAAGACTGGTTAACAAAAAATCATCAGGGTCTGCTCCAAATGAAAACAAGACTGAGTCATCCATAGCACCTTCCCTTATATCTTCTTCATCTAATCCAATTTTCTTGAATGAGATACCAAATATAGTTATTCCTACTGTTGGTAATGAATTTGATATGAATGTATCTCATGTGGCAATGATAAAGGATCTTCAGCAGGATTCAGTAAAACAATGGTCGAATGAATTTGTTGATATCAGCAAGAACCCTAAGCTTTCATCAACTTCAGTATCTTCTATTATGTCAAATATCTCCAATTCAAGCCATATGGATGCTTACAAAGTAGGACAACAAACGGGTTCTCCAATCAGGTATTATGGATCTTCTCATGTTAACAAATCATTACAAGAAGCATATATACAAAATTCTCTGGTTGAAATGCCATCGGAGGCAGATTGTGATTTTTGGAAAATGTTAGATAACATGAATATGCAATCAAATGAAGTCCAATTAGGGCAAGTTGATGCTAGCAAACCCTCAAATTTTGGACAAGAGGGTGTTCAAGATACTGAAACCGGAAAATATCTACATGAATTAGTGAATGAGTTTGGATCAGATGCAACAAAGGAGATAAACAAGGATCAATGCGTACAGAAGAATAATGCAGCTGAGCTAGGAATGTATCCTCATTCATTTGATTTTGATGTGATTGCAAGGCCACAATCTGATTCTGATATAGACTTAGGTTATGTTCAATGGTGGTCTTCTTGGCCTCAAAATCCAGGTCTTTAA 1116 0.3701 MGDGRSACCDKNQVMRGPWSSAEDLKLITFIQNYGHDNWRALPKRAGLMRCGKSCRLRWVNYLKPGLKRGNFTKEEVETIVKLQEALGNKWSKIASHLPGRTDNEIKNVWNTHLKKRLVNKKSSGSAPNENKTESSIAPSLISSSSNPIFLNEIPNIVIPTVGNEFDMNVSHVAMIKDLQQDSVKQWSNEFVDISKNPKLSSTSVSSIMSNISNSSHMDAYKVGQQTGSPIRYYGSSHVNKSLQEAYIQNSLVEMPSEADCDFWKMLDNMNMQSNEVQLGQVDASKPSNFGQEGVQDTETGKYLHELVNEFGSDATKEINKDQCVQKNNAAELGMYPHSFDFDVIARPQSDSDIDLGYVQWWSSWPQNPGL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0667 371 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lan7g0667 371 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Lan7g0667 371 MobiDBLite consensus disorder prediction 122 139 - -
Lan7g0667 371 Gene3D - 15 68 - -
Lan7g0667 371 MobiDBLite consensus disorder prediction 120 139 - -
Lan7g0667 371 Gene3D - 71 138 - -
Lan7g0667 371 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lan7g0667 371 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Lan7g0667 371 SMART sant 15 65 IPR001005 -
Lan7g0667 371 SMART sant 68 116 IPR001005 -
Lan7g0667 371 PANTHER - 1 335 - -
Lan7g0667 371 CDD SANT 71 114 IPR001005 -
Lan7g0667 371 CDD SANT 18 63 IPR001005 -
Lan7g0667 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Lan7g0667 371 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lan7g0667 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 335 - -
Lan7g0667 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0667 Lan-Chr7 5488712 5490749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0667 1 119 MYB Transcription Factor Family AT1G56160 73.950 8.21e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan7g0667 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0667 K09422 - gmx:100101836 370.163