Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0616 ATGAGGAATACTACAAGAACAAGAGTTGGAGAAATCGTTGAAGTAGAAGGTGGTCACATTGTACGGTCCACAGGGCGAAAAGACCGACATAGCAAAGTATGCACCGCTAAGGGACCAAGAGATAGACGTGTGCGCCTCTCGGCCCACACCGCCATTCAATTCTACGACGTCCAGGACCGTCTCGGCTACGACCGCCCCAGCAAGGCGGTCGATTGGCTAATAAATAAGGCCAAGTCCGCCATCGACAAACTCGCCGAGCTCCCTGCCTGGAACCCAACCACCACAACCAATTACGAACAAATAAACGGAATCCTTCACCGCCAACCACCCGCGGCGGAGGATGGAATAATTGGTTGTGGTGGTGGAAGAATATCAGAAGAGTTTCAACAACAGCAGCAACAGCAAGAAGAGGATTTTGCTGAAGAGAATAATAACAGTAACAGATATAACAGTGTTGGTTCTGGTTTTCTTCCACTGTCTATGGATACTGATATTGTGGATACGATTAAGTCGTTTTTTCCTATGGTTGCTGCTGCGAATCACAACCACCAGGAAGATCTAAGGCTCTCGTTACAATCATTCCAAGACCCCATTCTGCTTCACCACCAACAACAACAACAGATTCAGCAAATGTTGTTCACCGGAACTAACACGCTTGGGTTTGACGGTGGTGGTTCTTCTGGGTGGTTGGAGCAGCACCATGGTGAGGAACAGGAACAAGTACATGACCATGGTCGGTTTCATAGAATGGTGGCTTGGAATTCTGCTGTTACAGATGCTGGTAACAACGGCCATGGCGGTGGATTTGTCTTTAACTCGTCGCCGCCGTCGTTTGTGGCGCCGGCGAGTATGTTTGGCCATCATGGCCAGCATTTTTCTCAGAGGGGACCCCTTCAGTCCAATAACACTCCTTCAATTCGTGCTTGGATAGACCCGAATTCCTTTGCTGCTGCGGCAACTGTCGCCGCCGCCTCCCACCCCCATTATCAGTACCTTTCGCCGGCGATGCATCAGGCTTCTGTCTATGGCGGCATCGGGTTTGCCTCGCCTTCTGGTGGCTTCTCCGGCTTCCACATACCAGCACGAATTCAGGGTGAAGAGGAACGTGATGGCATTTCAGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGTCATTGA 1158 0.5052 MRNTTRTRVGEIVEVEGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSAIDKLAELPAWNPTTTTNYEQINGILHRQPPAAEDGIIGCGGGRISEEFQQQQQQQEEDFAEENNNSNRYNSVGSGFLPLSMDTDIVDTIKSFFPMVAAANHNHQEDLRLSLQSFQDPILLHHQQQQQIQQMLFTGTNTLGFDGGGSSGWLEQHHGEEQEQVHDHGRFHRMVAWNSAVTDAGNNGHGGGFVFNSSPPSFVAPASMFGHHGQHFSQRGPLQSNNTPSIRAWIDPNSFAAAATVAAASHPHYQYLSPAMHQASVYGGIGFASPSGGFSGFHIPARIQGEEERDGISDKPSSASSDSRH* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0616 385 ProSiteProfiles TCP domain profile. 26 84 IPR017887 -
Lan7g0616 385 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 385 IPR005333 GO:0003700
Lan7g0616 385 PANTHER TRANSCRIPTION FACTOR TCP4 3 385 - -
Lan7g0616 385 MobiDBLite consensus disorder prediction 364 385 - -
Lan7g0616 385 Pfam TCP family transcription factor 25 148 IPR017887 -
Lan7g0616 385 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0616 Lan-Chr7 4798138 4802888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0616 9 385 TCP Transcription Factor Family AT1G53230 49.873 3.94e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan7g0616 TCP 4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0616 - - aip:107630075 389.808