Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0607 ATGGGTCGCCCACCCAGTAATGGAAACCCTGCCTTTCGCTTCACTCAGTCTGAGGTATCTGAAATGGAAACTATTCTGCAAGTACACAACAATGCAATGCCATCACGTGATGTTATTCAAGCGCTTGCAGACAAGTTTAGTGAATCACCGGACCGTAGAGGCAAGATTACAGTGCAGATAAAGCAGATTTGGAATTGGTTTCAAAATAAGCGGTATGCTATAAGGGCAAAATTAAGTAAGACTCCTGGGAAGTTAAGTAACACACCTATGCCTCGGGATGATTCTGCTCCAGTAAGGACTATGCCTCCAGGCCCACCACCGACAGCTGCTCCAACTCCTGCTGCTTCAGGTTCAGTTCCAACAACAGGAAAAGAAACTCCAGAAAATTCGGTTATGGAATTTGAAGCTAAATCTAGAAGAGATGGAGCATGGTATGATGTGGCTTGTTTTCTATCACACAGAAATTTGGAGACCAATGATCCGGAAGTGCTAGTACGGTTTGCTGGTTTTGGATCAGAGGAAGATGAGTGGATTAATGTCCGCAGGAATGTCAGGCCACGTTCTTTGCCATGTGAATCATCAGAATGTATAGTAGTTCTTCCTGGAGATCTCATACTATGTTTTCAGGAAGGTAAAGAGCAAGCCCTTTACTTTGATGCACATGTGCTTGATGCTCAAAGGCGGAGGCATGATGTAAGAGGCTGTCGCTGTAGATTTTTGGTTCGTTATGATCATGATCAGACAGAGGAAATTGTGCCACTTAAGAAGATATGCCGAAGGCCTGAAAGTGAGTACAGGTTACAACAACTCAGAACTGCCAATGAGGCAGCATCTGAGAATCAGCAGAAGACTGCCATGGATCCAGCAAATGTTCATGCTACCAAGGTTTCGGGTTCTTCTGAAACAATGCCAAAACAGCAACAGAATGTGAGCATTCCTATCATAACGCCAGCTTCACAATCAAATGTTTCTCAAGTCCCAAATTTTATGAATGTGGATCCAAAGAAAGCTGAAACAATTCCTAGTTCTTCTGAATCAGCACCAAAGCAGCAGCATTCAAACATTCCTATGGTAACACCTGTTCCTGTTCCGCAGAAAAATGTTACTCCAGTCCCACATATGATGATTGTAGATCCAAAGAAAGCTGTAGCAGCTACTAATGTTCTATCTGGAAACGACTCCATCGTCCCCCCTGGCTTCGGTAGCATCATTACTACAGGCCGTGTTCCCGAAATCCCCAGTCAGAACATGGCTGAAGGAAAGTAA 1266 0.4408 MGRPPSNGNPAFRFTQSEVSEMETILQVHNNAMPSRDVIQALADKFSESPDRRGKITVQIKQIWNWFQNKRYAIRAKLSKTPGKLSNTPMPRDDSAPVRTMPPGPPPTAAPTPAASGSVPTTGKETPENSVMEFEAKSRRDGAWYDVACFLSHRNLETNDPEVLVRFAGFGSEEDEWINVRRNVRPRSLPCESSECIVVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQTEEIVPLKKICRRPESEYRLQQLRTANEAASENQQKTAMDPANVHATKVSGSSETMPKQQQNVSIPIITPASQSNVSQVPNFMNVDPKKAETIPSSSESAPKQQHSNIPMVTPVPVPQKNVTPVPHMMIVDPKKAVAATNVLSGNDSIVPPGFGSIITTGRVPEIPSQNMAEGK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0607 421 CDD homeodomain 13 75 IPR001356 GO:0003677
Lan7g0607 421 ProSiteProfiles 'Homeobox' domain profile. 5 77 IPR001356 GO:0003677
Lan7g0607 421 MobiDBLite consensus disorder prediction 79 129 - -
Lan7g0607 421 Gene3D - 129 190 - -
Lan7g0607 421 SUPERFAMILY Homeodomain-like 12 75 IPR009057 -
Lan7g0607 421 Gene3D - 9 83 - -
Lan7g0607 421 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 351 IPR039276 -
Lan7g0607 421 MobiDBLite consensus disorder prediction 337 362 - -
Lan7g0607 421 Gene3D - 191 263 - -
Lan7g0607 421 MobiDBLite consensus disorder prediction 337 360 - -
Lan7g0607 421 MobiDBLite consensus disorder prediction 96 113 - -
Lan7g0607 421 SMART HOX_1 7 81 IPR001356 GO:0003677
Lan7g0607 421 MobiDBLite consensus disorder prediction 114 128 - -
Lan7g0607 421 Pfam SAWADEE domain 132 258 IPR032001 GO:0003682
Lan7g0607 421 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0607 Lan-Chr7 4737809 4745776 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lan7g0607 SAWADEE 2.7e-40 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0607 - - gmx:100783895 498.049