Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0604 ATGGATAGCTACTATCACCACAACTTTGACAATAATGATGCACTATTACCACCTGGTTTTCGTTTCCACCCCACTGATGAGGAGCTTATTACATACTACCTCCTCAAGAAAGTTCTAGACAACACCTTCACTAGCAGAGCCATAACTGAAGTTGACCTCAACAAGTGCGAGCCATGGCAGCTCCCAGGGAAAGCTAAGATGGGTGAGAAGGAGTGGTACTTCTTTAGCTTACGTGACAGGAAGTACCCAACAGGGTTACGTACTAATAGGGCCACAGAAGCTGGTTATTGGAAAGCTACTGGGAAAGACAGAGAAATTTATAGCTCCAAGACTTGTGCACTTGTTGGTATGAAGAAAACTTTGGTTTTCTACAAAGGAAGAGCTCCAAAAGGTGAAAAAAGCAACTGGGTCATGCATGAGTATCGGCTTGAAGGCAAATTTGCTTACCATTACATCTCTAGGAGCTCCAAGGATGAATGGGTGATATCCCGTGTGTTCGAGAAGAGTACTGCTGGTGGTGGCTCCACCGTGTCTGCCACCGCCACTAACAGTTCTAAGAAGACTAGAGTTAGCATCTCATCTGCCAGCATGAGCCTAGGCCCGGAACCCGGTTCACCATCTTCCATTTACCTTCCACCACTGCTGGACTCTTCTCCGTACGCCGCCAGCAGCGCCGCCACATTCAACGACCTTGATGGCTGCTCCTACGACAGCACCACCGCTGCCCAAAGAGAGCACGTGTCCTGTTTCTCCACAAACTCAGCAAACAACTTCAACAATGGAACCTTTGACCTTGTTCCTCCACCGCCGCAGACTCCACTGAATCTTGACCCTTTCACTCGGTTTCAACGAAATGTTGGTGTCTCAGCCTTCCCTAGCCTGAGGTCACTCCAAGATAACCTCCAGATGCCGTTCTTTTTTTCCTCCGCTCCAGTCCACGGCGATGGTTCAAGTGATATGGCTGCTGTTGGGAACTGGCCGATGTCGGAGGAGCCGAAGGCTGTGGTGGCTGATGGTGTTTCCAGCATTGGTCTGGGGCATTCCGTGCTTGATTGCATGTGGGGCTATTGA 1071 0.4958 MDSYYHHNFDNNDALLPPGFRFHPTDEELITYYLLKKVLDNTFTSRAITEVDLNKCEPWQLPGKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFAYHYISRSSKDEWVISRVFEKSTAGGGSTVSATATNSSKKTRVSISSASMSLGPEPGSPSSIYLPPLLDSSPYAASSAATFNDLDGCSYDSTTAAQREHVSCFSTNSANNFNNGTFDLVPPPPQTPLNLDPFTRFQRNVGVSAFPSLRSLQDNLQMPFFFSSAPVHGDGSSDMAAVGNWPMSEEPKAVVADGVSSIGLGHSVLDCMWGY* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0604 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 317 - -
Lan7g0604 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 6 317 - -
Lan7g0604 356 SUPERFAMILY NAC domain 10 168 IPR036093 GO:0003677|GO:0006355
Lan7g0604 356 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lan7g0604 356 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
Lan7g0604 356 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0604 Lan-Chr7 4717845 4720164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0604 4 356 NAC Transcription Factor Family AT5G53950 54.400 3.12e-125 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan7g0604 NAM 3.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0604 - - gmx:100788671 499.975