Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0600 ATGACTGGCAAGGAAATCTTACATAAAATGAAGGAAAAGGTTTTGGGCTCATCTGACCCTGATTCAGGGAAAGGAAAGAGCAAGATTGACAAGCATATAACACATGGCTTTCACTTAGTAAAGGGAAAATCAAGACATCCCATGGAAGACTATGTTGTTGCTCAATTTAAGCAAGTTGATAACCATGAATTGGGTTTGTTTGCAATATTTGATGGCCACTCCGGTCACAACGTACCTGATTACTTGCAGTCTCACTTGTTTGACAACATCCTAAAAGAGCCCGATTTCTGGACAGAACCTGTGAATGCCGTCAAGAGAGCATATACTATGACTGATTCTACTATTCTAGAGAAATCAGGTGAATTGGGTAAAGGGGGTTCAACTGCAGTTACAGCAATATTGGTCAATTGTCAGCTGCTAATAGTAGCCAATATTGGAGATTCTCGTGCTGTTATATGCCAGAATGGGGTGGCCAAACCTCTATCAGTGGATCATGAACCAACAACTGAATATGAAGATATCAAAAACAGAGGTGGTTTTGTATCAAACTTCCCAGGGGATGTGCCACGGGTTGATGGACAGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAGCACTTGAGCTCAGAACCTTTTGTGACACTGGAGCCAATAGATGATGATGCAGAGTTTGTCATATTAGCTAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATGCTATCAGAGAAATAAAGGATGCTCGGTCTGCAGCAAAGCACCTTACTGAAGAAGCACTTAACAGGGAAAGCTCAGATGATATCTCCTGCGTTGTTGTGAGATTTCACTGA 849 0.4181 MTGKEILHKMKEKVLGSSDPDSGKGKSKIDKHITHGFHLVKGKSRHPMEDYVVAQFKQVDNHELGLFAIFDGHSGHNVPDYLQSHLFDNILKEPDFWTEPVNAVKRAYTMTDSTILEKSGELGKGGSTAVTAILVNCQLLIVANIGDSRAVICQNGVAKPLSVDHEPTTEYEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPFVTLEPIDDDAEFVILASDGLWKVMSNQEAVDAIREIKDARSAAKHLTEEALNRESSDDISCVVVRFH* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0600 282 Coils Coil 244 264 - -
Lan7g0600 282 Gene3D - 25 282 IPR036457 -
Lan7g0600 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Lan7g0600 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Lan7g0600 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 281 - -
Lan7g0600 282 MobiDBLite consensus disorder prediction 1 28 - -
Lan7g0600 282 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Lan7g0600 282 CDD PP2Cc 41 281 IPR001932 -
Lan7g0600 282 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Lan7g0600 282 SMART PP2C_4 24 279 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0600 Lan-Chr7 4674087 4677044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0600 1 282 PP2C-type Phosphatase Gene Family AT3G15260 76.125 1.18e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0600 K17506 - gmx:100787942 478.018