Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0599 ATGAGTATTGAGAGGAAGAGAGCATTGGTTGAGAAGGTGAGAAAGGATAGCATGGTTGAAAAAGAAGTGGAGAATGAAGTAAAGGAGGAGAATGAAAGTAGTGGTGTTGGACTTACAGAAGAAGAGAAGAAGAAAGGAATTGATGGGAGCAAAGGGTCATCAAGTTGGGGTGGAGGGGTTCCTCCACCTTCCTGTCAGGCAGAGAGGTGTGGGGCTGATCTGACCAATGCAAAGAAATACCATGGCCGCCATAAAGTGTGTGAGTTTCATTCCAAGGCACCTGTTGTGGTGGTTGCAGGCCTGAAGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACCTGGCTGAGTTTGATGAAGCTAAAAGAAGCTGCCGCAGACGCTTGGCTGGACATAACGAACGGCTCCGGAAAAGCAACTCGGAGAGCTGCAGCCACAGCAGAGGTCATCACCCTAAGGAAAGCCAGTGCAGGCTTGCTGATGAGAGGGGTCTTATTCCAATCAATATGGCAGGGAATTCTGGCTACAAATCTTTTCATATCAGATGA 549 0.4827 MSIERKRALVEKVRKDSMVEKEVENEVKEENESSGVGLTEEEKKKGIDGSKGSSSWGGGVPPPSCQAERCGADLTNAKKYHGRHKVCEFHSKAPVVVVAGLKQRFCQQCSRFHDLAEFDEAKRSCRRRLAGHNERLRKSNSESCSHSRGHHPKESQCRLADERGLIPINMAGNSGYKSFHIR* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0599 182 ProSiteProfiles Zinc finger SBP-type profile. 62 139 IPR004333 GO:0003677
Lan7g0599 182 MobiDBLite consensus disorder prediction 1 63 - -
Lan7g0599 182 Pfam SBP domain 65 138 IPR004333 GO:0003677
Lan7g0599 182 SUPERFAMILY SBT domain 63 143 IPR036893 GO:0003677|GO:0005634
Lan7g0599 182 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 33 149 IPR044817 GO:0003677
Lan7g0599 182 MobiDBLite consensus disorder prediction 136 156 - -
Lan7g0599 182 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 33 149 - -
Lan7g0599 182 MobiDBLite consensus disorder prediction 1 49 - -
Lan7g0599 182 Gene3D - 57 126 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0599 Lan-Chr7 4672294 4673580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0599 47 143 SBP-box Gene Family AT1G53160 67.010 2.73e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lan7g0599 SBP 3.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0599 - - aprc:113864686 231.491