Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0590 ATGGAATCATGCTTTGAGTCTAATGGAGGAGTCTCACCAGGACAACAATTGAAATTCACATCAGCCGAGACAAAAATTTCTAGTAATGACGATGGTTGCTTTGATTGCAATATCTGCTTAGAATCGGCGCATGAACCTGTGGTCACTCTCTGTGGCCACCTGTACTGCTGGCCATGCATATACAAGTGGATTCATGTCCAAAGCTCATCTGTTGAACCAGATCAGCAGCAGACTTGTCCAGTTTGTAAAACAGAGATCTCTCATGCTTCATTAGTCCCTCTTTATGGCCGCGGAACATCTAATTCACAATCTGATGGAGCCAAGCAACTCCAGATGGGTCGAGGGATACCTCATAGGCCTCCTCCTTACAACTTGAATGCTATGTTAGCTTCTACTCGTTCATCATTGAATTCACATCCTGCCCAGCAACTTCATCCAAGTTATTTCCAGTCACAATCGCGGCCAGTTCATTATCAGCAATACTTTCCTCACATGTATGGAGGTTATGGTGCCAATGGACTACCTTATCTCGGAGGAGCTGCTATGGCGAGTTTCTTCAATCCAATGATTGGTATGTTTGGGGATATGTTCTTGACAAGAACTTTTGGGGTCTCCGATGCAAATTTGTTTTCATACCATAATAATGGAAGTGGCAGTCCTAGTAGGATGAGAAGGCAGGAGATGCAAATTGACAAGTCTCTGAACAGAGTCTCTATCTTTCTTCTCTGTTGCATCATTTTGTGTCTCCTCTTATTCTGA 759 0.4348 MESCFESNGGVSPGQQLKFTSAETKISSNDDGCFDCNICLESAHEPVVTLCGHLYCWPCIYKWIHVQSSSVEPDQQQTCPVCKTEISHASLVPLYGRGTSNSQSDGAKQLQMGRGIPHRPPPYNLNAMLASTRSSLNSHPAQQLHPSYFQSQSRPVHYQQYFPHMYGGYGANGLPYLGGAAMASFFNPMIGMFGDMFLTRTFGVSDANLFSYHNNGSGSPSRMRRQEMQIDKSLNRVSIFLLCCIILCLLLF* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0590 252 CDD RING-HC_AtRMA_like 34 83 - -
Lan7g0590 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 154 IPR013083 -
Lan7g0590 252 SMART ring_2 36 82 IPR001841 -
Lan7g0590 252 SUPERFAMILY RING/U-box 31 95 - -
Lan7g0590 252 ProSiteProfiles Zinc finger RING-type profile. 36 83 IPR001841 -
Lan7g0590 252 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 3 252 IPR045103 GO:0005783|GO:0006511|GO:0061630
Lan7g0590 252 Pfam Zinc finger, C3HC4 type (RING finger) 36 82 IPR018957 GO:0046872
Lan7g0590 252 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RMA3-LIKE 3 252 - -
Lan7g0590 252 ProSitePatterns Zinc finger RING-type signature. 51 60 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0590 Lan-Chr7 4574848 4576946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0590 8 238 C3H Transcription Factor Family AT4G27470 46.154 3.70e-58 183