Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0574 ATGAACCACAAGGCCAACGTTTCTAAAGAGCTCAACGCCAAGCACAAAAAGATATTGGAAGGACTTCTAAAATTACCAGAGAATAAGGAATGTGCTGACTGCAAAACTAAAGGTCCAAGATGGGCTAGTGTCAATCTTGGCATCTTTATTTGCATGCAATGCTCAGGAATACATCGAAGTCTTGGGGTACACATATCAAAGGTTCGTTCTGCAACTTTGGACACTTGGCTCCCAGAGCAGGTTGCATTCATTCAATCGATGGGAAATGAGAAAGCAAATAGTTACTGGGAAGCAGAATTACCTCCACGTTATGATAGAGTTGGAATTGAAAATTTCATTCGTGCAAAGTATGAAGAAAAGAGGTGGGTTGCAAGGGATGGGAGACCAGCATCGCCTTCTAGATTGCAAGAAGAAAAATCTTCATCACATTGGCAGAGGCCTGTGGAAAGAGTTGGGAACGGTTATGGAATTACATCTGAGAATAATTTTGAGGAAAGGAAGAAAATCCAACCATCAAATGCAATTCCTGCTATAAGAATTAGTGTTCCTGCTCCTCCCAAAGGACCCGGGCAGGTAACACCTGTGACAAAACCTCAGCATATTGAGAAGGTGGAACCCATGGCAGCACAGCAGCAAGCTGAAACTTCGAATCAGGCTACTGGATCATATAAAAATACCCCTCCAAGAGTTGACTTTGCTACAGACCTTTTTGACATGTTGTCTGTGGATGGTCCAAGTGAAAAGGAAAGGGGTTCAGAGGCAGCTGGTGCTACTGATGATGATAATAACTGGGCAGGATTTCAGTCTGCTGCCGAGGCATCAACAGCTGAGAAGATGGATACCCCGAGTGCAGTTGAGAGTACACCGCAGCCTACTTCCCTAATTGAGGATCTATTTAAAGATTCACCTTCAGTGACGCCAAGCTTGGCTCCAGAAAAACCACAGAAAGATATAAAAAATGATATCATGAGCCTCTTTGAGAAGACCAATGTGGTGTCTCCATTTGCTATGCATCAGCAGCAGCTGGCCATGCTAGCACAGCAACAGTCTCTTCTAATGGCTGCCGCTACTAAATCTGCTGGTGGGGATCCCAAATATCCCGCTAGTGTACAACATCAACAGCAGCTGGCCATGCTGGCACAACAACAGTCTCTTCTAATGGCTGCCGCTACTAAATCTGCTGCGGTGGATCCCAAGTATCCTGCAAGCGTACAACAACCTGGATTCAACATTCCTGTTCAAAGTTGGCCAGCTGCCGGCTACCCAGTTCCTGGAGTAATGCCGATGGGTGGTCAGGGAGACTTGCAGAAACTCATGCAGACTATGAACACGACTGCAGCGCATCCAGCAGGCGGCTCAGTTCAATATCCACCATCTAGTTTCTATCCTCTGGGCCAAGTTGCTCCAGTTAACGGGACAATTACAACGGGAGTGAGTAAACCTCAATCTGCAGCTTCAGCATCATCAACCACTTCACAGACAGGGAAGGATTATGATTTTTCCTCCTTAACACAAGGAATGTTTGCGAAACAATGA 1536 0.4564 MNHKANVSKELNAKHKKILEGLLKLPENKECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPRYDRVGIENFIRAKYEEKRWVARDGRPASPSRLQEEKSSSHWQRPVERVGNGYGITSENNFEERKKIQPSNAIPAIRISVPAPPKGPGQVTPVTKPQHIEKVEPMAAQQQAETSNQATGSYKNTPPRVDFATDLFDMLSVDGPSEKERGSEAAGATDDDNNWAGFQSAAEASTAEKMDTPSAVESTPQPTSLIEDLFKDSPSVTPSLAPEKPQKDIKNDIMSLFEKTNVVSPFAMHQQQLAMLAQQQSLLMAAATKSAGGDPKYPASVQHQQQLAMLAQQQSLLMAAATKSAAVDPKYPASVQQPGFNIPVQSWPAAGYPVPGVMPMGGQGDLQKLMQTMNTTAAHPAGGSVQYPPSSFYPLGQVAPVNGTITTGVSKPQSAASASSTTSQTGKDYDFSSLTQGMFAKQ* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0574 511 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 371 IPR044520 GO:0005096
Lan7g0574 511 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 372 511 IPR044520 GO:0005096
Lan7g0574 511 Gene3D Arf GTPase activating protein 1 129 IPR038508 -
Lan7g0574 511 CDD ArfGap 19 117 - -
Lan7g0574 511 MobiDBLite consensus disorder prediction 478 499 - -
Lan7g0574 511 MobiDBLite consensus disorder prediction 242 256 - -
Lan7g0574 511 MobiDBLite consensus disorder prediction 209 227 - -
Lan7g0574 511 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Lan7g0574 511 MobiDBLite consensus disorder prediction 205 230 - -
Lan7g0574 511 MobiDBLite consensus disorder prediction 125 162 - -
Lan7g0574 511 MobiDBLite consensus disorder prediction 125 145 - -
Lan7g0574 511 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Lan7g0574 511 PANTHER ARF GTPASE ACTIVATOR 372 511 - -
Lan7g0574 511 PANTHER ARF GTPASE ACTIVATOR 1 371 - -
Lan7g0574 511 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Lan7g0574 511 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Lan7g0574 511 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Lan7g0574 511 MobiDBLite consensus disorder prediction 242 264 - -
Lan7g0574 511 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Lan7g0574 511 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0574 Lan-Chr7 4419387 4426370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0574 2 123 C2H2 Transcription Factor Family AT4G05330 44.615 1.05e-28 114