Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0571 ATGACCACCACAACAGACAACTCACATGGTTCACACATGCAATACTACACCACCACCACCACTGATGAAGACCAAGACATAGACGACGATGAAGACATTATCCACAGCGACCTAGACCAACAAAACCAACAACTCAACCTCCACCTCAACAACCATAAAGTACAACACAACAAAGACGTTGCCACAACCACCGGCGCCACCAGGCGCCGAGGCTGGTTTCTGGGTCGGGTTCTAGACCCGAGAGATAAATGGGTCCAAGAATGGAACAGGGTTTTCCTTCTAGTATGCGGAGCTGGGTTATTCATTGACCCACTCTTCTTCTACTCGCTCTCTCTGAGCGATACATGCATGTGCCTCTTCATTGATGGATGGTTCGCCGTCACTATAACGGTGCTCCGTTGCATGACGGATACCTTGCACGTGTGGAACATGTGGCTGCAGCTTAAGACGGATCAGAGATCCTTTGGTTTAGGTGCCGCCACCGTGGCTCGTGGCGCCGCCGCTGGATTCAGAGATATAAGCCCTCGTTCTGTTGCTCTTGGTTATCTCAAAGGGAGGAGAGGCTTCTTTCTTGACCTCTTTGTCATCCTTCCTATACCTCAGATTGTGCTTTGGGTAGGAATCCCGTGGCTGATGAAGAAAGGGTCAATAACGTTGGTGATGACAGTGTTGTTAATTATGTTTCTGTTCCAATACCTTCCCAAAATTTATCACGCTGTGTGCCATCTTCGACGCATGCAAAACCTCTCTGGCTACATTTTTGGAACCGTTTGGTGGGGTATCGCCCTTAACATGATCGCCTACTTTGTCGCTTCCCATGCAGCAGGGGCATGTTGGTACTTGCTGGGGATGCAAAGAGCATCTCAGTGTCTCACAGAGCAGTGTGATAAAACAAATGATTGTCGCATGAGAGTGTTGTCATGCAAACAAACTATATATTATGGGAGCCATAACTTTGGTATGGACAGAGCAAGGTTGGTATGGGCAGAAAACAGGGAAGCAAGGTTTACATGCTTGAATGGCCCTGATAACTACACCTATGGAGCTTATAGATGGACTGTTCAACTTGTCGCTAACGATAGCCGATTGGAAAAGATACTTTTCCCTATCTTCTGGGGCCTAATGACTCTCAGCACTTTTGGAAATATAGAGAGTACAACGGAGTGGCTAGAAGTAGTTTTCAACATCATTGTGTTGACTAGCGGCCTTCTTCTTGTCACTATGTTGATTGGAAACATAAAGGTTTTTTTGCATGCAACAACATCAAAGAAACAAGCAATGCAATTGAAGATGAGGAACATTGAGTGGTGGATGAGGAAAAGGCGTCTGCCACAAGGGTATAGGCAACGCGTGCGTAACTATGAAAGACAACGTTGGGCTGCAATGCGTGGAGTTGATGAATTTGAAATGACCAGAAATCTCCCTGAGGGTCTAAGAAGAGACATCAAATACCATCTTTGTTTGGATTTGGTGAGACAGGTGCCATTATTTCAGCATATGGATGACCTGGTCCTAGAGAACATTTGTGATCGAGTGAAATCTCTCATATTCACAAAGGGAGAAACGATAGCTAAAGAGGGAGACCCAGTTCAAAGAATGTTATTTGTAGTAAGGGGTCACCTTCAGAGTAGCCAAGTCTTAAGGGATGGTGTAAAAAGTTGCTGCATGTTAGGTCCAGGAAACTTCAGCGGCGACGAACTTCTTTCTTGGTGTTTAAGAAGACCCTTCATAGAAAGGCTTCCACCATCTTCATCCACACTCATTACACTAGAAACCACAGAGGCATTTGGACTTGAAGCAAAAGATGTGAAATATGTGACACAACATTTCAGGTATACATTTGTGAAAGAAAAGGTTAAGAGAAGTGCAAGATATTATTCTCCAGGTTGGAGAACTTGGGCTGCTGTGGCAATTCAATTAGCATGGAGGAGGTATAGGCATAGGTTGGCTTTGACATCATTGTCTTTTATTAGGCCTAGGAGGCCTTTGTCACGTTCATCTTCTTTGGGAGAAGATAGGCTTCGGCTCTATACGGCTTTGTTAACCTCACCAAAGCCTAATCAGGATGATTTTGATTTTTGA 2082 0.45 MTTTTDNSHGSHMQYYTTTTTDEDQDIDDDEDIIHSDLDQQNQQLNLHLNNHKVQHNKDVATTTGATRRRGWFLGRVLDPRDKWVQEWNRVFLLVCGAGLFIDPLFFYSLSLSDTCMCLFIDGWFAVTITVLRCMTDTLHVWNMWLQLKTDQRSFGLGAATVARGAAAGFRDISPRSVALGYLKGRRGFFLDLFVILPIPQIVLWVGIPWLMKKGSITLVMTVLLIMFLFQYLPKIYHAVCHLRRMQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGMQRASQCLTEQCDKTNDCRMRVLSCKQTIYYGSHNFGMDRARLVWAENREARFTCLNGPDNYTYGAYRWTVQLVANDSRLEKILFPIFWGLMTLSTFGNIESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPQGYRQRVRNYERQRWAAMRGVDEFEMTRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIAKEGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLETTEAFGLEAKDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLALTSLSFIRPRRPLSRSSSLGEDRLRLYTALLTSPKPNQDDFDF* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0571 693 MobiDBLite consensus disorder prediction 1 26 - -
Lan7g0571 693 MobiDBLite consensus disorder prediction 1 21 - -
Lan7g0571 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 14 690 - -
Lan7g0571 693 SUPERFAMILY cAMP-binding domain-like 422 610 IPR018490 -
Lan7g0571 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 14 690 - -
Lan7g0571 693 ProSiteProfiles cAMP/cGMP binding motif profile. 496 606 IPR000595 -
Lan7g0571 693 Gene3D Jelly Rolls 494 612 IPR014710 -
Lan7g0571 693 SUPERFAMILY Voltage-gated potassium channels 79 417 - -
Lan7g0571 693 Gene3D Helix hairpin bin 421 487 - -
Lan7g0571 693 CDD CAP_ED 496 602 IPR000595 -
Lan7g0571 693 Pfam Ion transport protein 88 413 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0571 Lan-Chr7 4372034 4380272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0571 64 692 Ion Channels AT5G54250 77.460 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0571 K05391 - gmx:100796761 1100.12