Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0560 ATGGAAGATGATAATCAATTCCAAGCAAGTGGAAACTGGTGGGAATCATCAAGGAACATGAGGTTTGAAAGTGGGGATCAATCACACTCTTCCTCATCAGGACTCACCAACATAGACAACTTTTGTTGGCAACAACAACAACAACATGACATGGTGGTGGATCACATGAAGACAAGGTCTAATTCTTCCATGGAAGGAGGAACTACCTCTGTGCAGGTTTTCCATGATAATCTTGAACACCAACAACAAGATTCTTGTGCCACTAATTCCACCAGTGACCACCCCAACTTGCATATGATGGGCTTGGGACTTTCATCTCAAGCCGTGGATTGGAATCAAGCATCTTTGCTAAGAGGTGAGAAAGCTTCAGAGAGCAGTTTCAGGTCGATGCTGCAAGAGAATTTGAGTTCATCAAACACCAATTTTCAGCATGAAACTGGAATTGGTTTATCTCAACGAGTTCAATGGAGGCCAGAAAATTCCACCAATGAATTCAAACAAGTGAATAATAGAAGTTTCTCTTTGGACCAAACTCAGTTTAGTCCTCAATATAGCTCTGGGGATAGTAATGTAACAAGCCAAGGCATACCCTCTACTTTTCACACGGATCATTACCCTTCAATGTTGCAAGGACTGTTAGGACCTGAAAGCAATCAACATCCTCAGCAAGGTTCATTTGAGAATATTCGACCCATGACTTTTCCATATTCAGCACGTCATGGCTTGAACTCTAACGAGTTAATACATTCTTGGTCTGCCTCTAAAGTTCCTCAGTTCTTGAGAGCTTCACCGCCAAAACAACAACTAACAAATAACCAGTTGCATTTCACTAACAACGCTCCCTTTTGGAATGCTTCTGAGGCGCCAGTTAAAGATGCTCGACCCAGCTTCTTTCCATCAATGCAACCACCATTTTCCACGCCAAATTTTGATGTACAATCAAAGAATATATCAGAAGTTAGGGACTCCGGTGCTGTGGTGAAAAAAAGTGGAAGTGAGCCTCCACCCAAAAGGCCCAGGAGTGAAACCTCATCACCTTTGCCTGCTTTTAAGGTGAGAAAAGAAAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTGCGCCTTTCGGAAAGACTGATACAGCCTCAGTGCTATCTGAAGCCATTGAATACATCAAATTTCTCCATGAACAAGTCACTGTTTTAAGCACCCCATATATGAGAAGTGGAGTTCCCACACAGCATCAGCAGAATTCTGGTAAATCTAAGGAAGGTGAGGGACCAAAGCAGGATCTTAGAAGCCGAGGGCTATGCTTGGTACCAGTTTCTAGTACATTTCCAGTGACTCATGAACCCTCAGTTGATTTTTGGACACCAACATTTGGAGGAACTTACAGATAA 1386 0.4278 MEDDNQFQASGNWWESSRNMRFESGDQSHSSSSGLTNIDNFCWQQQQQHDMVVDHMKTRSNSSMEGGTTSVQVFHDNLEHQQQDSCATNSTSDHPNLHMMGLGLSSQAVDWNQASLLRGEKASESSFRSMLQENLSSSNTNFQHETGIGLSQRVQWRPENSTNEFKQVNNRSFSLDQTQFSPQYSSGDSNVTSQGIPSTFHTDHYPSMLQGLLGPESNQHPQQGSFENIRPMTFPYSARHGLNSNELIHSWSASKVPQFLRASPPKQQLTNNQLHFTNNAPFWNASEAPVKDARPSFFPSMQPPFSTPNFDVQSKNISEVRDSGAVVKKSGSEPPPKRPRSETSSPLPAFKVRKEKMGDRITALQQLVAPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMRSGVPTQHQQNSGKSKEGEGPKQDLRSRGLCLVPVSSTFPVTHEPSVDFWTPTFGGTYR* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0560 461 Gene3D - 351 410 IPR036638 GO:0046983
Lan7g0560 461 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 9 450 - -
Lan7g0560 461 MobiDBLite consensus disorder prediction 178 205 - -
Lan7g0560 461 MobiDBLite consensus disorder prediction 319 350 - -
Lan7g0560 461 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 341 390 IPR011598 GO:0046983
Lan7g0560 461 MobiDBLite consensus disorder prediction 404 427 - -
Lan7g0560 461 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 9 450 - -
Lan7g0560 461 CDD bHLH_AtbHLH_like 347 398 IPR045239 -
Lan7g0560 461 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 351 406 IPR036638 GO:0046983
Lan7g0560 461 MobiDBLite consensus disorder prediction 178 207 - -
Lan7g0560 461 SMART finulus 352 396 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0560 Lan-Chr7 4256033 4259405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0560 118 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 45.619 9.75e-75 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0560 - - lang:109352127 924.465