Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0556 ATGGACTCCCAGCAGCTTTTCAACTTCTGCATAACTACTCCAGAAGGGCTACCTTACACGTCAACTTATCCTACTTTTCCACACTTACCCAACCAGCTGCTTGAATCCTTGAAAACTGACATAAGAAACTCACCCAATTCGGCCCTTTCTACTCATTTTGATTCTGATACTCTTTCTGTATTGAGTGACAGCCAAGAGCAGCACAACTCTGTGGAATTTCTATCTAGTGCCAGCCCTTCTTGTAACTCTTTGTTGGAAACCAATCATTATTTGCATAGGCCTGCCTCATCTGTGGACCATCTCCGAGACGGTTTGCATCTAGATTGTGTCAGGAGCTCTCTTCCACAGGATGTAAATTGTGACCGTGAAACTAGAAACACACTGAAGGAACTAGAATCTGCTTTAATGGCACCTGATGGTGATGATGATGTTACCACATCGAATACTTCTTTGAGTGATAGCAACAGGCCGTCGACATCTGGTCAAAGAAATAGGTCCTGGAGCCATGAACGTCCAGGATCTGAATATATTCAAAGTCATCGTTCTTATGTTCTTAGTAGTAGGCAGTCAACTGAAATTCCACGTGCAGAGAAACGTCACAAAACAATGGAGGAAGCATTGCCAGAAGACCTGCCATCAAACAGTTTGAAGCAATTGTTCCTTCTATGTGCTATAGCCTTGTCAGAAAACAATATGATAGATTTTGATCAATTGATAAGAAAGGCTAGAAGTGTTGTGTCCATTAGTGGAGAACCAATCCAGCGACTTGGTGCTTATTTGGCAGAAGGGCTTGTTGCAAGGAAGGAGGCATCAGGGAGTAACATATATCGTGCCCTTAACTGCAAAGAGCCTGTAGGCAAAGATTTACTCTCACACATGCAGATGCTGTATGAAATCTGCCCATACTTAAAATTTGGTTACATGGCTGCCAATGGAGCTATTGCCGAAGCATGCAGAAAGGAGGACCGCATTCACATCATAGACTTTCAGATTTCTCAAGGAACTCAATGGGTGACTCTCCTTCAAGCTCTAGCTGCAAGGCCTGGTGGGGCTCCACACGTGAGGATCACGGGGATCGACGATCCTGTTTCTAAATATGCTCGTGGCAATGGACTTGAAGCAGTCGGGAGAAGGCTGGCCATAATCTCTGAGAAATGTGGCATCCCAGTTGAGTTTCATGGTGTGCCTGTTTTAGCTCCAGATGTGACAAGGGACATGCTTGATGTCAGGCCCGGAGAGGCTTTGGCTGTGAACTTCCCTTTGCATCTCCACCACACAGCTGATGAGAGCGTTGATGTAAGCAATCCAAGGGATGGACTTCTGAGATTGGTAAAGTCACTTTCTCCTAAGGTAACCACACTGGTGGAGCAGGAATCGAACACAAATACAACTCCTTTCTTCAACAGGTTTGCTGAAACCCTGGATTATTACTTGGCAATATTTGAGTCCATTGATGTCACTTTCCCTAGAGAGAGCAAGGATCGGATTAATATGGAGCAACATTGTCTAGCCCGCGATATTGTGAACGTTATTGCTTGTGAAGGGAAGGAGAGGGTAGAGCGACACGAACTGTTCGGCAAGTGGAAATCTAGGTTTACAATGGCCGGCTTCCGCCAATATCCTATGAGCTCTTATGTGAATTCTGTTATAAGAAGCCTCCTGAGGTGCTATTCAGAGCATTATACGCTCCACGAGAAGGACGGGACCATGTTTTTGGGATGGAAGAATAGAAATTTAATATCAGCTTCAGCCTGGCATTGA 1761 0.4486 MDSQQLFNFCITTPEGLPYTSTYPTFPHLPNQLLESLKTDIRNSPNSALSTHFDSDTLSVLSDSQEQHNSVEFLSSASPSCNSLLETNHYLHRPASSVDHLRDGLHLDCVRSSLPQDVNCDRETRNTLKELESALMAPDGDDDVTTSNTSLSDSNRPSTSGQRNRSWSHERPGSEYIQSHRSYVLSSRQSTEIPRAEKRHKTMEEALPEDLPSNSLKQLFLLCAIALSENNMIDFDQLIRKARSVVSISGEPIQRLGAYLAEGLVARKEASGSNIYRALNCKEPVGKDLLSHMQMLYEICPYLKFGYMAANGAIAEACRKEDRIHIIDFQISQGTQWVTLLQALAARPGGAPHVRITGIDDPVSKYARGNGLEAVGRRLAIISEKCGIPVEFHGVPVLAPDVTRDMLDVRPGEALAVNFPLHLHHTADESVDVSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFAETLDYYLAIFESIDVTFPRESKDRINMEQHCLARDIVNVIACEGKERVERHELFGKWKSRFTMAGFRQYPMSSYVNSVIRSLLRCYSEHYTLHEKDGTMFLGWKNRNLISASAWH* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0556 586 MobiDBLite consensus disorder prediction 177 191 - -
Lan7g0556 586 ProSiteProfiles GRAS family profile. 207 586 IPR005202 -
Lan7g0556 586 Pfam GRAS domain family 217 585 IPR005202 -
Lan7g0556 586 MobiDBLite consensus disorder prediction 142 167 - -
Lan7g0556 586 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 22 586 - -
Lan7g0556 586 MobiDBLite consensus disorder prediction 132 198 - -
Lan7g0556 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 586 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0556 Lan-Chr7 4202739 4205964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0556 209 585 GRAS Transcription Factor Family AT1G50600 61.538 3.91e-172 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan7g0556 GRAS 3.7e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0556 - - gmx:100775665 865.529