Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0555 ATGAAAGAGGAGTCAATAGGACTAATTATTGGGGGTTCAATAGGTGTTGTTATTGGAGTCATTTTGGCAATTTCTGCAGTCTTTTGCTTTAGGTACCACCGAAAGCGTTCACAGATCGGGAATAGCAGTTCCCGAAGGGCTGCTACCATACCTATTCGGACAAATGGTGATGATTCTTGTATCATTCTATCAGACTCAACCATAGGTACAGAGTCACCGGTAAAGTCTAGACGAAATGGCATGTTCTTCTGGCTTGATGGGTTTAAGAAGAGTAACATGTTTTCAGCATCTGGACTACCTAAATATCCATACAAGGATTTGCAGAAGGCAACATATAATTTTACTACAGTCATAGGACAAGGTGCATTTGGTCCTGTTTATAAAGCTCAAATATCTACTGGTGAGACTGTTGCTGTTAAGGTTCTTGCAACTAATTCTAAGCAAGGAGAGAAAGAATTTTACACCGAGGTTATGTTGTTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGATCGGATATTGTGCAGAAAAGGGGAAACATATGCTTGTATATGTCTACATGAGCAAGGGTAGCTTGGCTTCTCACTTATATGGAGAAGGGAATGAAGCTCTGAGCTGGGATTTGAGGGTTCACATTGCTCTAGATGTAGCAAGAGGATTAGAGTATCTTCATGATGGGGCAGTTCCTCCAGTAATCCATCGAGATATTAAATCTTCCAATATTCTATTGGACCGGTCCATGCGAGCCAGGGTTGCTGATTTTGGACTTTCAAGGGAAGAGATGGTGGATAAACACGCAGCTATTCGGGGTACATTTGGTTATCTTGACCCGGAGTATATATCTTCAGGGACATTCACCATAAAAAGTGATGTATATAGTTTTGGGGTGTTGCTCTTTGAAATTATAGCTGGAAGAAACCCTCAGCAGGGTCTTATGGAGTACGTTGAGCTTGCAGCAATGAATGCCGAGGAGAAAGTTGGTTGGGAAGAACTTGTAGATTCTCACCTTGAAGGAGGTTTCAATGTCCAAGAGTTCAATGAAGTTGCAGTCCTTGCCTACAAATGTGTCAACATCGCCCCAAGGAAGCGCCCTTCTATGACGGACATAGTCGAAGTGTTAACAAGAATCCTTAAATCAAGGCATCATAGAAATCATCACAATAAGACCTTGTCATCCACATCAGATGAAGTTTACATTGATCTTGATCAGACAGGGAACAAGAATTCTGTTACTGACCACCAAAGGCAAGAATCAGTGGATAGTACAACAGACAATGAAGTGTAG 1287 0.4149 MKEESIGLIIGGSIGVVIGVILAISAVFCFRYHRKRSQIGNSSSRRAATIPIRTNGDDSCIILSDSTIGTESPVKSRRNGMFFWLDGFKKSNMFSASGLPKYPYKDLQKATYNFTTVIGQGAFGPVYKAQISTGETVAVKVLATNSKQGEKEFYTEVMLLGRLHHRNLVNLIGYCAEKGKHMLVYVYMSKGSLASHLYGEGNEALSWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDRSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTIKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNAEEKVGWEELVDSHLEGGFNVQEFNEVAVLAYKCVNIAPRKRPSMTDIVEVLTRILKSRHHRNHHNKTLSSTSDEVYIDLDQTGNKNSVTDHQRQESVDSTTDNEV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0555 428 MobiDBLite consensus disorder prediction 405 428 - -
Lan7g0555 428 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Lan7g0555 428 CDD STKc_IRAK 118 377 - -
Lan7g0555 428 SUPERFAMILY Protein kinase-like (PK-like) 101 391 IPR011009 -
Lan7g0555 428 MobiDBLite consensus disorder prediction 414 428 - -
Lan7g0555 428 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Lan7g0555 428 PANTHER OS01G0253100 PROTEIN 5 403 IPR045271 GO:0004714|GO:0006468
Lan7g0555 428 Gene3D Transferase(Phosphotransferase) domain 1 188 401 - -
Lan7g0555 428 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0555 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Lan7g0555 428 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 403 - -
Lan7g0555 428 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0555 Lan-Chr7 4191331 4195885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0555 101 395 Receptor kinase-like Gene Family AT2G28970 43.137 1.48e-72 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lan7g0555 PK_Tyr_Ser-Thr 1.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0555 - - gmx:100799586 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0555 7 4191331 4195885 Lan8g1429 8 21436868 21441579 LSH