Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0554 ATGCCAACAGTGTGGTTTTCTTTGAAGAAATCTCTACAGTGCAAATCTGAGCCATCTGATGTACATGACCCAAAATCAAGGAAGCATTTGAGCACAATCTTGACCAAAAGAGGAGGAAGATCAGGGTGTTCAAGGTCCATAGCAAATCTCAAAGATGTAATCCATGGAAGCAAGAGGCATATTGAGAAGCCACCAGATTGCAGTCCAAGATCTATAGGGAGTAGTGAGTTCCTCAACCCCATAACTCATGAAGTCATTTTGAGTAACTCAAGGTGTGAGCTCAAAATCACTGGCTATGGAGGGTTCCAAGAAGGGGTTAGCAATGGTGATGGTAGTAATAGTAACAATGCTAATGGTAGTAGTAGTGGTTCAACATTTGTAGGTACTTTGAGGCCTGGGACACCTGGACCTGGAGGGCACCCTACAATGCATTACTTTAACCCTTCTTTTAGGACCTCATCAACTCCTCCAAGGAAATCTCCTTTCCTTTTGTCAGAAGGGTCTGGTTTTCATCATAGTGCTGGACTTCATTCAAGCAATAGGATGTCTCTTGAGACAGATTCAAATGGTTCTTCAACTGTGACTTGCCACAAATGTGGAGAACAATTTAACAAATGGGAAGCTGCTGAAGCTCATCATCTATCCAAGCATGCTGTTACTGAACTTGTGGAAGGTGATTCATCAAGGAAAATAGTGGAGATCATATGCAGAACAAGCTGGTTAAAGTCTGAGAACCACTGTGGTAGAATTGAGAGAGTTTTGAAAGTCCACAACATGCAAAAGACATTGGCTAGATTTGAAGAGTACAGGGAGATGGTGAAAATCAAAGCAAGCAAACTCCAAAAGAAGCATCCTAGGTGCCTAGCTGATGGAAATGAGCTTTTGAGGTTCTATGGCACCACTGTTGCATGCTCTCTTGGTCACAATGGCTCTTCAAGTCTTTGCCTATCAGAAAAATGTTGTGTGTGTAGAATCATCAGAAATGGTTTTTCTGCCAAAAAGGAGCTCAGGGATGGTATAGGTGTTTTCACAACATCCACAAGTGGAAGAGCTTTTGAGTCTATAGAGATTATTGATGATGACCCATCACTTAGAAAAGCACTTATTGTGTGCAGAGTTATTGCTGGCAGGGTTCATAGGCCTCTGGAGAACATTCAGGAAATGGCAGCACAAACAGGCTTTGACTCATTGGCTGGAAAAGTTGGTCTATATTCAAATATTGAGGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTAATTTGCAAACCATGA 1287 0.4196 MPTVWFSLKKSLQCKSEPSDVHDPKSRKHLSTILTKRGGRSGCSRSIANLKDVIHGSKRHIEKPPDCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVSNGDGSNSNNANGSSSGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEGSGFHHSAGLHSSNRMSLETDSNGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGHNGSSSLCLSEKCCVCRIIRNGFSAKKELRDGIGVFTTSTSGRAFESIEIIDDDPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0554 428 PANTHER - 2 428 - -
Lan7g0554 428 SUPERFAMILY ADP-ribosylation 219 427 - -
Lan7g0554 428 Gene3D - 209 427 - -
Lan7g0554 428 MobiDBLite consensus disorder prediction 107 129 - -
Lan7g0554 428 ProSitePatterns Zinc finger C2H2 type domain signature. 196 217 IPR013087 -
Lan7g0554 428 MobiDBLite consensus disorder prediction 107 138 - -
Lan7g0554 428 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0554 Lan-Chr7 4184827 4187129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0554 1 428 C2H2 Transcription Factor Family AT5G54630 68.750 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan7g0554 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0554 - - lang:109355134 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0554 7 4184827 4187129 Lan8g1430 8 21444601 21447017 LSH